Detail information of GWHGAAZE009607


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_008235516.10PREDICTED: 3-ketoacyl-CoA thiolase 2, peroxisomal [Prunus mume]
Swissprottr|Q56WD9|THIK2_ARATH3E-1633-ketoacyl-CoA thiolase 2, peroxisomal (Precursor)
trEMBLtr|M5VYZ5|M5VYZ5_PRUPE0Uncharacterized protein {ECO:0000313|EMBL:EMJ02203.1}
TAIR10AT2G33150.15E-136peroxisomal 3-ketoacyl-CoA thiolase 3

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene113406153113414969-
GWHAAZE00000002mRNA113406153113414969-
GWHAAZE00000002exon113414889113414969-
GWHAAZE00000002exon113413899113413947-
GWHAAZE00000002exon113413751113413818-
GWHAAZE00000002exon113413472113413579-
GWHAAZE00000002exon113413302113413379-
GWHAAZE00000002exon113412916113413048-
GWHAAZE00000002exon113412704113412800-
GWHAAZE00000002exon113412370113412493-
GWHAAZE00000002exon113412145113412253-
GWHAAZE00000002exon113411663113411716-
GWHAAZE00000002exon113411431113411535-
GWHAAZE00000002exon113408844113409021-
GWHAAZE00000002exon113408587113408709-
GWHAAZE00000002exon113407902113408013-
GWHAAZE00000002exon113407640113407750-
GWHAAZE00000002exon113407424113407547-
GWHAAZE00000002exon113407213113407263-
GWHAAZE00000002exon113407030113407126-
GWHAAZE00000002exon113406673113406838-
GWHAAZE00000002exon113406484113406592-
GWHAAZE00000002exon113406153113406205-
GWHAAZE00000002CDS113414889113414969-
GWHAAZE00000002CDS113413899113413947-
GWHAAZE00000002CDS113413751113413818-
GWHAAZE00000002CDS113413472113413579-
GWHAAZE00000002CDS113413302113413379-
GWHAAZE00000002CDS113412916113413048-
GWHAAZE00000002CDS113412704113412800-
GWHAAZE00000002CDS113412370113412493-
GWHAAZE00000002CDS113412145113412253-
GWHAAZE00000002CDS113411663113411716-
GWHAAZE00000002CDS113411431113411535-
GWHAAZE00000002CDS113408844113409021-
GWHAAZE00000002CDS113408587113408709-
GWHAAZE00000002CDS113407902113408013-
GWHAAZE00000002CDS113407640113407750-
GWHAAZE00000002CDS113407424113407547-
GWHAAZE00000002CDS113407213113407263-
GWHAAZE00000002CDS113407030113407126-
GWHAAZE00000002CDS113406673113406838-
GWHAAZE00000002CDS113406484113406592-
GWHAAZE00000002CDS113406153113406205-
Transcript Sequence

Network for GWHGAAZE009607

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00108.24Thiolase_N261911.40E-46
PF02803.19Thiolase_C2003017.00E-41
PF00108.24Thiolase_N4525871.20E-30
PF02803.19Thiolase_C5967096.70E-31
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K07513ACAA1 Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Fatty acid metabolismmap01212
Fatty acid degradationmap00071
alpha-Linolenic acid metabolismmap00592
Biosynthesis of unsaturated fatty acidsmap01040
Valine, leucine and isoleucine degradationmap00280
Peroxisomemap04146
PPAR signaling pathwaymap03320

Gene Ontology

GO term OntologyName
GO:0003824molecular_functioncatalytic activity
GO:0016747molecular_functiontransferase activity, transferring acyl groups other than amino-acyl groups

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf31.842
SRR3591706second leaf35.570
SRR3591707mature leaf46.142
SRR3591708Shoot apex30.327
SRR3591709Stem48.493
SRR3591710White floral bud235.182
SRR3591711White flower518.759
SRR3591712Green floral bud52.926
SRR3591713Yellow flower380.550
SRP173429 SRR8316895Juvenile bud stage 68.841
SRR8316896Juvenile bud stage 72.658
SRR8316897Juvenile bud stage 52.477
SRR8316894Third green stage 13.882
SRR8316900Third green stage 30.804
SRR8316901Third green stage 59.527
SRR8316898Complete white stage 36.650
SRR8316899Complete white stage 112.253
SRR8316903Complete white stage 52.624
SRR8316902Silver flowering stage394.551
SRR8316904Silver flowering stage459.059
SRR8316905Silver flowering stage288.533
SRR8316906Gold flowering stage 987.352
SRR8316907Gold flowering stage 906.137
SRR8316908Gold flowering stage 834.499
SRP132670SRR6706286Control60.414
SRR6706287Light intensity 50%50.026
SRR6706288Light intensity 20%49.753
CNP0000432CNS0095592Slightly white alabastrum(diploid) 1100.091
CNS0095593Slightly white alabastrum(diploid) 277.985
CNS0095594Slightly white alabastrum(diploid) 3103.734
CNS0095595Whole white alabastrum(diploid) 259.902
CNS0095596Whole white alabastrum(diploid) 333.575
CNS0095597Whole white alabastrum(diploid) 457.611
CNS0095598Silvery flower (diploied) 1183.099
CNS0095599Silvery flower (diploied) 2188.708
CNS0095600Silvery flower (diploied) 3315.305
CNS0095601Golden flower (diploid) 1216.834
CNS0095602Golden flower (diploid) 2222.931
CNS0095603Golden flower (diploid) 3221.164
CNS0095604Slightly white alabastrum(tetraploid) 132.599
CNS0095605Slightly white alabastrum(tetraploid) 236.198
CNS0095606Slightly white alabastrum(tetraploid) 356.788
CNS0095607Whole white alabastrum(tetraploid) 127.592
CNS0095608Whole white alabastrum(tetraploid) 223.912
CNS0095609Whole white alabastrum(tetraploid) 340.153
CNS0095610Silvery flower (tetraploid) 1112.565
CNS0095611Silvery flower (tetraploid) 2130.404
CNS0095612Silvery flower (tetraploid) 3278.094
CNS0095613Golden flower (tetraploid) 1131.585
CNS0095614Golden flower (tetraploid) 293.554
CNS0095615Golden flower (tetraploid) 3239.407
CRA001975CRR073297Stem 175.340
CRR073298Stem 270.282
CRR073299Stem 368.791
CRR073300Leaf 156.015
CRR073301Leaf 266.199
CRR073302Leaf 352.220
CRR073303Juvenile bud 140.795
CRR073304Juvenile bud 252.933
CRR073305Juvenile bud 351.594
CRR073306Third green 11073.606
CRR073307Third green 2739.120
CRR073308Third green 3718.475
CRR073309Second white 11603.784
CRR073310Second white 21160.379
CRR073311Second white 31191.277
CRR073312Silver flowering 1993.415
CRR073313Silver flowering 2968.245
CRR073314Silver flowering 3717.306
CRR073315Gold flowering 149.369
CRR073316Gold flowering 288.841
CRR073317Gold flowering 370.901
CRR073318Tawny withering 160.129
CRR073319Tawny withering 2140.334
CRR073320Tawny withering 357.610