Detail information of GWHGAAZE009582


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002273696.10PREDICTED: GPI transamidase component PIG-T [Vitis vinifera]
trEMBLtr|F6HQ50|F6HQ50_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CCB56806.1}
TAIR10AT3G07140.10GPI transamidase component Gpi16 subunit family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene112822298112828128-
GWHAAZE00000002mRNA112822298112828128-
GWHAAZE00000002exon112827853112828128-
GWHAAZE00000002exon112825544112826797-
GWHAAZE00000002exon112824568112824717-
GWHAAZE00000002exon112824299112824479-
GWHAAZE00000002exon112822298112822555-
GWHAAZE00000002CDS112827853112828128-
GWHAAZE00000002CDS112825544112826797-
GWHAAZE00000002CDS112824568112824717-
GWHAAZE00000002CDS112824299112824479-
GWHAAZE00000002CDS112822371112822555-
GWHAAZE00000002three_prime_UTR112822298112822370-
Transcript Sequence

Network for GWHGAAZE009582

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04113.15Gpi1617833.30E-13
PF04113.15Gpi16976256.80E-158
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K05292PIGT Metabolic pathways map01100
Glycosylphosphatidylinositolmap00563

Gene Ontology

GO term OntologyName
GO:0016255biological_processattachment of GPI anchor to protein
GO:0042765cellular_componentGPI-anchor transamidase complex

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf35.499
SRR3591706second leaf21.693
SRR3591707mature leaf12.410
SRR3591708Shoot apex29.164
SRR3591709Stem22.228
SRR3591710White floral bud17.685
SRR3591711White flower20.575
SRR3591712Green floral bud29.348
SRR3591713Yellow flower12.525
SRP173429 SRR8316895Juvenile bud stage 20.221
SRR8316896Juvenile bud stage 26.028
SRR8316897Juvenile bud stage 13.199
SRR8316894Third green stage 11.626
SRR8316900Third green stage 31.269
SRR8316901Third green stage 29.672
SRR8316898Complete white stage 9.938
SRR8316899Complete white stage 30.359
SRR8316903Complete white stage 15.296
SRR8316902Silver flowering stage8.399
SRR8316904Silver flowering stage11.375
SRR8316905Silver flowering stage5.438
SRR8316906Gold flowering stage 17.944
SRR8316907Gold flowering stage 17.067
SRR8316908Gold flowering stage 18.548
SRP132670SRR6706286Control21.099
SRR6706287Light intensity 50%23.722
SRR6706288Light intensity 20%25.157
CNP0000432CNS0095592Slightly white alabastrum(diploid) 125.210
CNS0095593Slightly white alabastrum(diploid) 223.202
CNS0095594Slightly white alabastrum(diploid) 323.952
CNS0095595Whole white alabastrum(diploid) 221.928
CNS0095596Whole white alabastrum(diploid) 325.331
CNS0095597Whole white alabastrum(diploid) 420.591
CNS0095598Silvery flower (diploied) 114.811
CNS0095599Silvery flower (diploied) 214.633
CNS0095600Silvery flower (diploied) 322.226
CNS0095601Golden flower (diploid) 111.297
CNS0095602Golden flower (diploid) 221.400
CNS0095603Golden flower (diploid) 321.848
CNS0095604Slightly white alabastrum(tetraploid) 128.252
CNS0095605Slightly white alabastrum(tetraploid) 228.432
CNS0095606Slightly white alabastrum(tetraploid) 333.038
CNS0095607Whole white alabastrum(tetraploid) 118.590
CNS0095608Whole white alabastrum(tetraploid) 216.668
CNS0095609Whole white alabastrum(tetraploid) 325.209
CNS0095610Silvery flower (tetraploid) 118.234
CNS0095611Silvery flower (tetraploid) 219.137
CNS0095612Silvery flower (tetraploid) 317.012
CNS0095613Golden flower (tetraploid) 17.967
CNS0095614Golden flower (tetraploid) 218.091
CNS0095615Golden flower (tetraploid) 313.341
CRA001975CRR073297Stem 130.626
CRR073298Stem 230.232
CRR073299Stem 331.920
CRR073300Leaf 130.101
CRR073301Leaf 227.294
CRR073302Leaf 329.474
CRR073303Juvenile bud 128.935
CRR073304Juvenile bud 223.693
CRR073305Juvenile bud 332.737
CRR073306Third green 19.685
CRR073307Third green 210.139
CRR073308Third green 310.776
CRR073309Second white 114.670
CRR073310Second white 212.436
CRR073311Second white 312.591
CRR073312Silver flowering 114.197
CRR073313Silver flowering 214.721
CRR073314Silver flowering 313.243
CRR073315Gold flowering 112.388
CRR073316Gold flowering 217.589
CRR073317Gold flowering 315.094
CRR073318Tawny withering 133.321
CRR073319Tawny withering 227.185
CRR073320Tawny withering 332.580