Detail information of GWHGAAZE009423


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_009801448.12.16934E-69PREDICTED: transcription repressor OFP3-like [Nicotiana sylvestris]
Swissprottr|Q9LVL4|OFP3_ARATH6E-42Transcription repressor OFP3
trEMBLtr|F6GUC1|F6GUC1_VITVI3E-77Putative uncharacterized protein {ECO:0000313|EMBL:CCB43408.1}
TAIR10AT5G58360.15E-32ovate family protein 3

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene110021751110022703+
GWHAAZE00000002mRNA110021751110022703+
GWHAAZE00000002exon110021751110022185+
GWHAAZE00000002exon110022263110022703+
GWHAAZE00000002CDS110021751110022185+
GWHAAZE00000002CDS110022263110022703+
Transcript Sequence

Network for GWHGAAZE009423

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13724.7DNA_binding_21475.30E-20
PF04844.14Ovate2302861.40E-25
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyOFP

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003677molecular_functionDNA binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf6.079
SRR3591706second leaf5.907
SRR3591707mature leaf6.365
SRR3591708Shoot apex3.159
SRR3591709Stem17.647
SRR3591710White floral bud165.616
SRR3591711White flower272.096
SRR3591712Green floral bud5.629
SRR3591713Yellow flower355.340
SRP173429 SRR8316895Juvenile bud stage 3.265
SRR8316896Juvenile bud stage 4.984
SRR8316897Juvenile bud stage 1.065
SRR8316894Third green stage 3.947
SRR8316900Third green stage 6.218
SRR8316901Third green stage 5.578
SRR8316898Complete white stage 30.776
SRR8316899Complete white stage 12.745
SRR8316903Complete white stage 60.494
SRR8316902Silver flowering stage40.611
SRR8316904Silver flowering stage74.455
SRR8316905Silver flowering stage42.983
SRR8316906Gold flowering stage 94.885
SRR8316907Gold flowering stage 92.696
SRR8316908Gold flowering stage 94.667
SRP132670SRR6706286Control6.981
SRR6706287Light intensity 50%7.965
SRR6706288Light intensity 20%4.532
CNP0000432CNS0095592Slightly white alabastrum(diploid) 12.988
CNS0095593Slightly white alabastrum(diploid) 24.475
CNS0095594Slightly white alabastrum(diploid) 35.108
CNS0095595Whole white alabastrum(diploid) 22.268
CNS0095596Whole white alabastrum(diploid) 33.321
CNS0095597Whole white alabastrum(diploid) 43.250
CNS0095598Silvery flower (diploied) 123.677
CNS0095599Silvery flower (diploied) 225.928
CNS0095600Silvery flower (diploied) 381.851
CNS0095601Golden flower (diploid) 127.671
CNS0095602Golden flower (diploid) 263.442
CNS0095603Golden flower (diploid) 361.928
CNS0095604Slightly white alabastrum(tetraploid) 14.825
CNS0095605Slightly white alabastrum(tetraploid) 22.546
CNS0095606Slightly white alabastrum(tetraploid) 36.410
CNS0095607Whole white alabastrum(tetraploid) 13.108
CNS0095608Whole white alabastrum(tetraploid) 22.869
CNS0095609Whole white alabastrum(tetraploid) 33.037
CNS0095610Silvery flower (tetraploid) 172.556
CNS0095611Silvery flower (tetraploid) 285.055
CNS0095612Silvery flower (tetraploid) 3483.364
CNS0095613Golden flower (tetraploid) 1287.487
CNS0095614Golden flower (tetraploid) 2103.947
CNS0095615Golden flower (tetraploid) 3327.884
CRA001975CRR073297Stem 112.159
CRR073298Stem 216.130
CRR073299Stem 315.368
CRR073300Leaf 18.627
CRR073301Leaf 27.586
CRR073302Leaf 35.688
CRR073303Juvenile bud 112.460
CRR073304Juvenile bud 24.943
CRR073305Juvenile bud 311.756
CRR073306Third green 1166.122
CRR073307Third green 2159.017
CRR073308Third green 3148.920
CRR073309Second white 1131.314
CRR073310Second white 2149.776
CRR073311Second white 3114.622
CRR073312Silver flowering 1167.272
CRR073313Silver flowering 2120.531
CRR073314Silver flowering 3151.888
CRR073315Gold flowering 16.152
CRR073316Gold flowering 27.985
CRR073317Gold flowering 32.992
CRR073318Tawny withering 125.669
CRR073319Tawny withering 28.617
CRR073320Tawny withering 336.320