Gene detail

Detail information of GWHGAAZE009361

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_007208348.1	0	hypothetical protein PRUPE_ppa001820mg [Prunus persica]
Swissprot	tr\|Q9MB58\|F26_ARATH	0	Fructose-2,6-bisphosphatase
trEMBL	tr\|M4ERX6\|M4ERX6_BRARP	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:Bra031553.1-P}
TAIR10	AT1G07110.1	1E-118	fructose-2,6-bisphosphatase

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000002	gene	108663173	108673418	+
GWHAAZE00000002	mRNA	108663173	108673418	+
GWHAAZE00000002	exon	108663173	108663367	+
GWHAAZE00000002	exon	108664215	108664278	+
GWHAAZE00000002	exon	108664369	108664664	+
GWHAAZE00000002	exon	108665148	108665262	+
GWHAAZE00000002	exon	108665972	108666058	+
GWHAAZE00000002	exon	108666151	108666407	+
GWHAAZE00000002	exon	108667659	108667865	+
GWHAAZE00000002	exon	108667979	108668074	+
GWHAAZE00000002	exon	108669603	108669701	+
GWHAAZE00000002	exon	108669796	108669825	+
GWHAAZE00000002	exon	108672376	108672429	+
GWHAAZE00000002	exon	108672869	108672922	+
GWHAAZE00000002	exon	108673001	108673078	+
GWHAAZE00000002	exon	108673182	108673273	+
GWHAAZE00000002	exon	108673349	108673418	+
GWHAAZE00000002	CDS	108663173	108663367	+
GWHAAZE00000002	CDS	108664215	108664278	+
GWHAAZE00000002	CDS	108664369	108664664	+
GWHAAZE00000002	CDS	108665148	108665262	+
GWHAAZE00000002	CDS	108665972	108666058	+
GWHAAZE00000002	CDS	108666151	108666407	+
GWHAAZE00000002	CDS	108667659	108667865	+
GWHAAZE00000002	CDS	108667979	108668074	+
GWHAAZE00000002	CDS	108669603	108669701	+
GWHAAZE00000002	CDS	108669796	108669825	+
GWHAAZE00000002	CDS	108672376	108672429	+
GWHAAZE00000002	CDS	108672869	108672922	+
GWHAAZE00000002	CDS	108673001	108673078	+
GWHAAZE00000002	CDS	108673182	108673273	+
GWHAAZE00000002	CDS	108673349	108673418	+

Transcript Sequence
>GWHTAAZE009371 ATGGGGACTGGTGCATCGATGAACCACCAGGACTGTAGCTCCGATGGCAGCGAAGAGAGAGAAGACGAAGCCGGTAGTGGAGGACAGCTTTACGTATCTCTCAAAATGGAGAATTTCTACAAGCTCAAAGGCGACCTAATCCCTCATGTCTTCGGCTCTCTCCCCCTCGTCGGTTCTTGGAACTCTTCTAAAGCCCTTTCTATGGAACGCGAATCAACCTCGATGTGGGAATTGAGTTTTGTTGTCCCTCCCAATCACGAAGCATTGGACTTCAAGTTCCTTTTGAAGCCGAAGTACAGTAATGTGCCATGTATAGTGGAGGATGGTCCAAACAGGCTTCTCAGTGGGGGGATTTTGCAAGGTGATGGAAGGTTGGCTCAATTTAGGCTTAATGATGACGAGGTTCTTGACTACAGGGTATTTGTTAAAGCCGACGAGGTTTCGCCGTTTGATCTTGCGGCTAGTTGGAGAGCGTATCAAGAGCATTTCCGGCCTTCTACTGTTCGCGGGATTCCTGATGTCAGTATGAATTTAGTAATGGAGAGGGGCCCTGAGGAAGTGTGTGCATGCGGGATGTCTAATGTCCCTCAATCTTGCTTGTGGTATGAGGCGCACATCCCAAGTGGGACACCTGATGAAGCAAGACATTCATTGTTTCCAAGTTTACAAGGTGCTGCCAGCATATGCTTCGTGACTGGATTAAATTCTTTAAGTTCATCCTTATCCCTTTTATCCTTTCTTGACCAGATAGTCCATGTAAAATCTCAGCTTGATTTTCTCCCATTTTATGCACAGGATGGTTCTTCAACAAGTTTGGAGCTTGATTTAGAACATTATCTTGTCCCAGCTCCAGAAACTCCTGAAAATTCAGGTTCGGTTTATGCTGCCAACATGACAGAGAGTCCACGGTCATTTAATAGTGCTGAGGTAATCTCGAATAGTGATGGCTCAGGGAGTGCATCGCATTCTGACAAGGATGGTCGTGTTTCCATTGATCGACCTGCAACAATAAAGGAGATGGAAGTTATCACCCCATATCCGTCTAAGGTGTATTCAGGTGGCATGTTTGAATCGAAATCAGAGGGGACATTTTCACCTTTACACAATCAAGATGGTCGCAAAGGACTCTTTGTGGATAGAGGTGTGGGATCTGCTAGGCTATTTAAATCGGCTAGTGCAACTACCTTCACTAGTGATCATAGACTTGATTCAGAAGCTAAGAATTCGATGCCAGAGGCTGCAGGAGCTGTTGCAGCTGCAGCCGTAGCCGATCAAATGCTTGGACTCAAGGAGGATATGCATTTGGCAATTGTCCTGGTTGGCCTGCCAGCTCGTGGAAAGACTTTTACTGCAGCTAAACTTACGAGGTATCTTCGCTGGTTGGGTCATGAGACCAAACACTTCAATGTTGGGAAGTATCGAAGACTCAAGCATGGAGCTAATCAGTCTGCTGATTTTTTCCGAGCTGACAATCAAGAAGGCATGGAGGCACGAAATGAGGTAGCAGCCCTAGCAATGGATGATATGATCGCTTGGATGCAAGAAGGTGGCCAAGTTGGAATATTTGATGCCACAAACAGTAACAAGCAGCGAAGGAATATGCTAATGAAAATGGCTGAAGGAAAATGCAAGATTATTTTTTTGGAAACAATATGCAACGATCAGAAAATTATTGAAAGAAATATACGCCTCAAAATTCAACAAAGCCCCGATTATGCAGAAGTGCCAGATTTTGAAGCTGGATATCGAGACTTCAAAAATCGGCTTGATAATTATGAAAAAGTAGCTTTCTGA

Network for GWHGAAZE009361

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF01591.19	6PF2K	430	594	2.50E-66

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K01103	PFKFB3	Metabolic pathways	map01100
		Fructose and mannose metabolism	map00051
		HIF-1 signaling pathway	map04066
		AMPK signaling pathway	map04152

Gene Ontology

GO term	Ontology	Name
GO:0006000	biological_process	fructose metabolic process
GO:0006003	biological_process	fructose 2,6-bisphosphate metabolic process
GO:2001070	molecular_function	starch binding
GO:0003873	molecular_function	6-phosphofructo-2-kinase activity
GO:0005524	molecular_function	ATP binding
GO:0003824	molecular_function	catalytic activity
GO:0030246	molecular_function	carbohydrate binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	19.636
	SRR3591706	second leaf	18.020
	SRR3591707	mature leaf	22.335
	SRR3591708	Shoot apex	15.480
	SRR3591709	Stem	21.254
	SRR3591710	White floral bud	16.283
	SRR3591711	White flower	21.160
	SRR3591712	Green floral bud	11.657
	SRR3591713	Yellow flower	23.967
SRP173429	SRR8316895	Juvenile bud stage	10.097
	SRR8316896	Juvenile bud stage	14.799
	SRR8316897	Juvenile bud stage	6.801
	SRR8316894	Third green stage	8.759
	SRR8316900	Third green stage	15.284
	SRR8316901	Third green stage	17.127
	SRR8316898	Complete white stage	9.948
	SRR8316899	Complete white stage	25.871
	SRR8316903	Complete white stage	18.178
	SRR8316902	Silver flowering stage	12.762
	SRR8316904	Silver flowering stage	18.328
	SRR8316905	Silver flowering stage	10.362
	SRR8316906	Gold flowering stage	28.310
	SRR8316907	Gold flowering stage	28.984
	SRR8316908	Gold flowering stage	25.835
SRP132670	SRR6706286	Control	25.035
	SRR6706287	Light intensity 50%	25.013
	SRR6706288	Light intensity 20%	24.878
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	8.236
	CNS0095593	Slightly white alabastrum(diploid) 2	6.066
	CNS0095594	Slightly white alabastrum(diploid) 3	6.669
	CNS0095595	Whole white alabastrum(diploid) 2	6.855
	CNS0095596	Whole white alabastrum(diploid) 3	5.437
	CNS0095597	Whole white alabastrum(diploid) 4	5.929
	CNS0095598	Silvery flower (diploied) 1	16.228
	CNS0095599	Silvery flower (diploied) 2	10.002
	CNS0095600	Silvery flower (diploied) 3	20.694
	CNS0095601	Golden flower (diploid) 1	8.074
	CNS0095602	Golden flower (diploid) 2	19.699
	CNS0095603	Golden flower (diploid) 3	18.742
	CNS0095604	Slightly white alabastrum(tetraploid) 1	8.114
	CNS0095605	Slightly white alabastrum(tetraploid) 2	6.840
	CNS0095606	Slightly white alabastrum(tetraploid) 3	14.639
	CNS0095607	Whole white alabastrum(tetraploid) 1	7.302
	CNS0095608	Whole white alabastrum(tetraploid) 2	5.405
	CNS0095609	Whole white alabastrum(tetraploid) 3	11.689
	CNS0095610	Silvery flower (tetraploid) 1	29.173
	CNS0095611	Silvery flower (tetraploid) 2	25.940
	CNS0095612	Silvery flower (tetraploid) 3	15.995
	CNS0095613	Golden flower (tetraploid) 1	15.089
	CNS0095614	Golden flower (tetraploid) 2	19.334
	CNS0095615	Golden flower (tetraploid) 3	31.206
CRA001975	CRR073297	Stem 1	17.806
	CRR073298	Stem 2	16.493
	CRR073299	Stem 3	9.345
	CRR073300	Leaf 1	18.710
	CRR073301	Leaf 2	18.131
	CRR073302	Leaf 3	9.942
	CRR073303	Juvenile bud 1	8.307
	CRR073304	Juvenile bud 2	6.801
	CRR073305	Juvenile bud 3	11.338
	CRR073306	Third green 1	4.830
	CRR073307	Third green 2	3.750
	CRR073308	Third green 3	3.554
	CRR073309	Second white 1	3.582
	CRR073310	Second white 2	5.739
	CRR073311	Second white 3	5.236
	CRR073312	Silver flowering 1	3.287
	CRR073313	Silver flowering 2	4.071
	CRR073314	Silver flowering 3	3.632
	CRR073315	Gold flowering 1	8.276
	CRR073316	Gold flowering 2	15.444
	CRR073317	Gold flowering 3	4.865
	CRR073318	Tawny withering 1	9.290
	CRR073319	Tawny withering 2	8.630
	CRR073320	Tawny withering 3	6.989