Gene detail

Detail information of GWHGAAZE009350

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_011080787.1	0	PREDICTED: uncharacterized protein LOC105163946 [Sesamum indicum]
Swissprot	tr\|Q9LUZ6\|TBL44_ARATH	9E-159	Protein PMR5
trEMBL	tr\|A0A068ULS1\|A0A068ULS1_COFCA	0	Coffea canephora DH200=94 genomic scaffold, scaffold_36 {ECO:0000313\|EMBL:CDP09207.1}
TAIR10	AT5G58600.1	4E-137	Plant protein of unknown function (DUF828)

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000002	gene	108357369	108376974	+
GWHAAZE00000002	mRNA	108357369	108376974	+
GWHAAZE00000002	exon	108357369	108357458	+
GWHAAZE00000002	exon	108358157	108360553	+
GWHAAZE00000002	exon	108360642	108360771	+
GWHAAZE00000002	exon	108361658	108361746	+
GWHAAZE00000002	exon	108362152	108362396	+
GWHAAZE00000002	exon	108364167	108364253	+
GWHAAZE00000002	exon	108364352	108364451	+
GWHAAZE00000002	exon	108365327	108365531	+
GWHAAZE00000002	exon	108367141	108367187	+
GWHAAZE00000002	exon	108367269	108367394	+
GWHAAZE00000002	exon	108367581	108367686	+
GWHAAZE00000002	exon	108371778	108372006	+
GWHAAZE00000002	exon	108374049	108374223	+
GWHAAZE00000002	exon	108374312	108374490	+
GWHAAZE00000002	exon	108374628	108374786	+
GWHAAZE00000002	exon	108376632	108376974	+
GWHAAZE00000002	CDS	108357369	108357458	+
GWHAAZE00000002	CDS	108358157	108360553	+
GWHAAZE00000002	CDS	108360642	108360771	+
GWHAAZE00000002	CDS	108361658	108361746	+
GWHAAZE00000002	CDS	108362152	108362396	+
GWHAAZE00000002	CDS	108364167	108364253	+
GWHAAZE00000002	CDS	108364352	108364451	+
GWHAAZE00000002	CDS	108365327	108365531	+
GWHAAZE00000002	CDS	108367141	108367187	+
GWHAAZE00000002	CDS	108367269	108367394	+
GWHAAZE00000002	CDS	108367581	108367686	+
GWHAAZE00000002	CDS	108371778	108372006	+
GWHAAZE00000002	CDS	108374049	108374223	+
GWHAAZE00000002	CDS	108374312	108374490	+
GWHAAZE00000002	CDS	108374628	108374786	+
GWHAAZE00000002	CDS	108376632	108376974	+

Transcript Sequence
>GWHTAAZE009360 ATGGCGGCCGACATTGGAATACGCCAAAGAAGAAAGCGCAAAAGACCCAACAATGATCAACGAAAGCTTCTAGAAAACGAAAAAGTTGAAGTAAGGAGTGTTGAAGAGGGGTTTCTTGGTTCATGGCACTTGGGAACCGTAATTGTCTGCAAACGTCATGTTCGTGAGGTCCAATACGACTCTCTGTTGTGCGACGACGGCTTTGGAAATCTTGTTGACCATGTTCAAGTTTCTCCGGCTGTTGATGGCATCGGTCTCACCAAAGAGGTGCCAATTAAACACCGCGGCTTTATAAGGCCACTACCACCCCCTTGCGAATTTGGTAAATGGTCAGTCCATTATGGACAGTGTGTTGATGTGCTTTACGAAGATGCTTGGTGGGAAGGTGTAATTTTTGACCACGAAGATGGTTCTGAGGAGCGAGCAGTCTTCTTTCCCGATATGGGTGACGAATTAAAGGCCACAATTGATGTTAATATGTTACGTATTACTCAAGATTGGGACGAGGTTAATGGAGATTGGAATCCTCGTGGGGACTGGTTATTTCTCGAGTTGATCGAGGAAGTTGAACAAGAGTGGCCCGTTGTTGTTTCTGTGAAGCAAATTTGGTATGAAGTTCGGGTGAGAAAGGGCTTTGAGAATCTCAAGGATTGGACTTCTTCGGGGAGGGATGCTTGGAAAGAGTTGGTCTTGCAGGCTGTTATCGATAATTTTAAGATAACTGTGTTGGAACTTGTTCACAATGTGTCCTTGTGGGATGGGTCGTTGCAGGAAATGTCTGGATCGGATCTCGATTCTTTATTGAAATCCAAATCACATTTTGGTGATTCTCTTGAGGTTGTACCATTTAAAACAAATAAAACTACTGAGTTAGTTGAAGAGGAAACTGATTGGCATAATTTGGCATCTCTCATTGAGGGTGGTAGATCAGACATGAATCTGTCTACCACCTCAATCGAGCCTGAACCTGCAGAAGCACTATGTGTAAAATCTCCCGCTTTGTTGACTGTACCTTCTAATCCTGATGAATTATCTAGGATAAGTTCCCATAAAAACTGCGAAGTATCTTCTAGTACAAAATCTGAAATGCAGAAAATACGAAAGGAGTGGCTTCCTGCTGGCCCTGACATTGTTCCCGAAGCTGAGTATTGCCCAGATGCAATTGCTGAATACAACAACCATTGTAAGCTCGGTCATAGAAGCAGTGCGTTAGTATCGAAAGCAAGGATGCATCTCTTGTATATGGGCTGGAAAATTCAGTATTTAAAGGAAGGTAATCAAGTTAGAGTCCGTTACATCTCGCCTAATAATAAGTATTACCATTCGCTCCTTTTGCTCTGTAAGCATTTGAGTGAGCCTTTGACAGGAAGTCCTTCTCGGATCCCCAATGACAATGAACAAAGTTATTTAGTTACTGGAAAACTACTTGCATGCCAGGTGGCACCATTGGAGCCTTCCCCTGATAATGTTGTAGTTATCGAGCCCGAGTACTTCCCTCAGGCTATAGTGGACTATATATCATATTGGGAAAATGACTCCCATACCTTAAAGAGAGATGATAAGTTTAAGGATATGAAATTAAGAGCACAGAAGCACTTGTGTGCTTCCGGGTGGTCATTTTTTTATGATCGGATGCGGCGTAGGAAGGAAATGCAGTACCGATCACCAAGTGACAAGATCTACAAGAACCTTCTTAAAGCATGCGAAAGTCATATAGATGATGAACGGGAAAAGTCGGATATAAATGCATATGCTCTTTCAAGAAGACAAAACATAAATGTCAATGAGGAGCCTCCCGTTATATCACCATCGACAGAGCTTGTGGAAGTATGTAAAGTTAAAGTCCAACGAACTAGAAAACAACGAAGGAGAAGAGACGGTGTACTATGCCTTGCTAGTCACTTGCCTCGCACAAAAGATAAAAATTCTTTCAAGAAGGGGGAGGGATCATTAGCTTTGGTCAAAGTAATGGATAATTTGAACTCAAACAATAATATTTCGACCCGTGTGCTTCGATCAAGCAAACGGGCTCGAACGGTGGTTCCTTCTCCCTCTCACAACACCCCTCGAACCGTATTGTCTTGGTTGATAGAGAAGAATGTGGTTTTGCCCAGGGCAAAAGTATATTACCGGGGCCAAAGGGATGGCCGTATAATGGCTGAAGGGAGGGTAACTCGTGATGGGATAAAGTGCAGTTGTTGCCATGGTATTTTTACAATTAGAAACTTTGAACCTCATGCTGGTGGTACAAATCGTAGACCTACAGGCAATTTATTTCTTGAGGATGGTAAGTCCCTACTAGAGTGCCAGTTGCAATTGAGAAAAGAAATTTGTCTAAAAAGCATCAAAACAAAATCACGTGAGGTAAAGGGTAGTCGAAATCACAAGAAGAATGACCATATATGTTCTGTTTGTCACTACGGGGGTGAATTAGTGTTGTGTGATCAATGTCCGTCCTCGTTTCATACAAGTTGCCTCGGTTTGAAAGAGGTTCCAGATGGTGACTGGTTCTGCCCATCTTGCTGTTGTAGAATTTGTGGCGAAAGCAGATTTAATAAAGACACTGAGCAATTTATGGATAATAGTGCTCTCAACTGTCATCAGTGTGAGCATCAATATCATGTTGGGTGCCTAAGGAGAAAAGGTCTATTAAAGCTTGACTGTTATCCTAGAGGAAATTGGTTTTGCAATAAAAGATGTGAACAGATATCTTTGGGCCTTGGAAAGCTTTTGCGGAAACCAATTCCCTTGGGGGTAGATAATTTAACTTGGACTTTATTGAAGCACATGCCATCTGAAAGCTTCGATCAAGATGGCTCTAATATCGAGGAATTGGCGGAGAGTTACATCAAGCTTCATGTTGCTCTTGATGTGATGCATGAGTGTTTTGAGCCGGTTAAAGAACCTCGGACCAAGAGGGATCTTGTTGAAGATGTCATTTTCAGTAGATGGTCAGAATTAAACCGTTTGAATTTTCAAGGGTTCTATACTGTGCTTTTGGAGAGAAATGATGAACTGATTACAGCAGCTACTGTGAGGGTTTATGGAGAAAAAGTTGCGGAAGTCCCTCTTGTTGCGACACGGTTTCAATACCGGCGACTTGGAATGTGTCGCATTTTGATGAAGGAACTTGAAAAGAAACTCACAGAATTAGGAGTGGAGAGGCTAGTTTTGCCTGCTGTTCCAAGTGTGCTACACACTTGGACGTCTTCATTTGGGTTTTCTCCGATGATAGAATGCGAGAGATTAAAGTTTCTTGATTGCACTTTCCTTGACTTCCAGGGTACCATTATGTGCCAGAAACTCATGAAGATCCCCTCCTCAAAATCAAGTGTATTTAGACGTGATGACAGAAATGGCTGCAATGTCAGAGCTCCGATTGTTATTGCGGTGGACCAACCAACTGATCAGGAGCCTGTACCATGTCGAAGTGAAATAACCGTAGGGTGCTCAGTTAATCACAAGGAAGGTGAGAGCAAGAATGACGGACTTTTCAAATGCTATAAGCGTAGAAGGATTCCTCATTTTCTGCAAAGGGTAGGGATAGGAGTCACCGTAGTTAGGTCTCCAGCTCTTGTACAGTTGTGGAAAGAGCCGGAGCCGGAGCCGGAGCTCCTTCTATGTTTAAAGAATCACCACCATAATCCCCACCATAGAAGGCCAATACTCCAATCTAACGGCACAGGTTGTGCTATATTTATGGGGAGTTGGGTTCATGATGAAAACTACCCACTTTACGAATACTCTGCTTGCCCAATGATAGACCCTCAGTTCAATTGCCAACAGTACGGCCGACCCGACACAGATTACCTCAAGTATCGATGGAGGCCAGCCAATTGTGAGCTCCCCAGGTTCAATGGGCTACAGTTTCTGTTGAGAATGAAAGGGAAAACAGTGATGTTTGTGGGTGACTCACTGGGCCGCAACCAATGGGAGTCGTTGATTTGTTTGATCTCAGCTACAGTCCCAGCTGGATCCTCCACACAGATGATCAGAGGAGATCCTTTATCAACCTTCAAATTTTTGGAGTACAGCGTGACGGTGTCGTATTACAAAGCACCGTATTTGGTGGACATTGAACTAATGCAAGGGAGGAGAGTGCTGAAATTGGATGATATATCGGGGAATGGGAACGCGTGGAGGGGTGTGGATGTGCTGTCGTTTAACACCGGTCACTGGTGGTCACACAAAGGTTCTCTCCAAGGGTGGGACTACATAGATTCAGGAGGGAAATTGTATCAAGATATGGATCGAGTGGTTGCTTTAGAAAGAGGACTAAAAACGTGGGCCAGATGGGTGGACAGCAATGTGGACACCAGCAGAACCAGAGTATTCTTTCAGTCAATCTCACCTACGCACTACGACCCAGCAGAATGGAGTATTGGGTTATCATCGGGGGCGAAAAGTTGCTACGGAGAGACTTTACCGACGAGTGGCAGCATTGGCACAAATTACCCGACAGGGGCATACACAGACCAAGTGAAGGTGGTCGAGACTGTTATAAGGGAGATGAATTATCCTGCTTTTATACTTGACATAACCATGCTCTCAGCTATGAGAAAAGACGCCCACCCCTCTATCTACAGCGGGGACTTGAGCCCTGAGCAAAGGGCTAACCCTGACCACGCGGCTGACTGTAGCCATTGGTGCCTCCCTGGCTTGCCAGATACTTGGAACCAGCTCTTCTACACCGCTTTATTCTACTAA

Network for GWHGAAZE009350

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF05641.13	Agenet	27	103	7.30E-13
PF16135.6	TDBD	722	772	5.10E-20
PF00628.30	PHD	801	843	3.50E-08
PF14416.7	PMR5N	1229	1281	2.80E-21
PF13839.7	PC-Esterase	1282	1564	4.20E-90

Protein Sequence

>GWHPAAZE009355
MAADIGIRQRRKRKRPNNDQRKLLENEKVEVRSVEEGFLGSWHLGTVIVCKRHVREVQYDSLLCDDGFGNLVDHVQVSPAVDGIGLTKEVPIKHRGFIRPLPPPCEFGKWSVHYGQCVDVLYEDAWWEGVIFDHEDGSEERAVFFPDMGDELKATIDVNMLRITQDWDEVNGDWNPRGDWLFLELIEEVEQEWPVVVSVKQIWYEVRVRKGFENLKDWTSSGRDAWKELVLQAVIDNFKITVLELVHNVSLWDGSLQEMSGSDLDSLLKSKSHFGDSLEVVPFKTNKTTELVEEETDWHNLASLIEGGRSDMNLSTTSIEPEPAEALCVKSPALLTVPSNPDELSRISSHKNCEVSSSTKSEMQKIRKEWLPAGPDIVPEAEYCPDAIAEYNNHCKLGHRSSALVSKARMHLLYMGWKIQYLKEGNQVRVRYISPNNKYYHSLLLLCKHLSEPLTGSPSRIPNDNEQSYLVTGKLLACQVAPLEPSPDNVVVIEPEYFPQAIVDYISYWENDSHTLKRDDKFKDMKLRAQKHLCASGWSFFYDRMRRRKEMQYRSPSDKIYKNLLKACESHIDDEREKSDINAYALSRRQNINVNEEPPVISPSTELVEVCKVKVQRTRKQRRRRDGVLCLASHLPRTKDKNSFKKGEGSLALVKVMDNLNSNNNISTRVLRSSKRARTVVPSPSHNTPRTVLSWLIEKNVVLPRAKVYYRGQRDGRIMAEGRVTRDGIKCSCCHGIFTIRNFEPHAGGTNRRPTGNLFLEDGKSLLECQLQLRKEICLKSIKTKSREVKGSRNHKKNDHICSVCHYGGELVLCDQCPSSFHTSCLGLKEVPDGDWFCPSCCCRICGESRFNKDTEQFMDNSALNCHQCEHQYHVGCLRRKGLLKLDCYPRGNWFCNKRCEQISLGLGKLLRKPIPLGVDNLTWTLLKHMPSESFDQDGSNIEELAESYIKLHVALDVMHECFEPVKEPRTKRDLVEDVIFSRWSELNRLNFQGFYTVLLERNDELITAATVRVYGEKVAEVPLVATRFQYRRLGMCRILMKELEKKLTELGVERLVLPAVPSVLHTWTSSFGFSPMIECERLKFLDCTFLDFQGTIMCQKLMKIPSSKSSVFRRDDRNGCNVRAPIVIAVDQPTDQEPVPCRSEITVGCSVNHKEGESKNDGLFKCYKRRRIPHFLQRVGIGVTVVRSPALVQLWKEPEPEPELLLCLKNHHHNPHHRRPILQSNGTGCAIFMGSWVHDENYPLYEYSACPMIDPQFNCQQYGRPDTDYLKYRWRPANCELPRFNGLQFLLRMKGKTVMFVGDSLGRNQWESLICLISATVPAGSSTQMIRGDPLSTFKFLEYSVTVSYYKAPYLVDIELMQGRRVLKLDDISGNGNAWRGVDVLSFNTGHWWSHKGSLQGWDYIDSGGKLYQDMDRVVALERGLKTWARWVDSNVDTSRTRVFFQSISPTHYDPAEWSIGLSSGAKSCYGETLPTSGSIGTNYPTGAYTDQVKVVETVIREMNYPAFILDITMLSAMRKDAHPSIYSGDLSPEQRANPDHAADCSHWCLPGLPDTWNQLFYTALFY

Gene family

Gene family	subfamily
Transcription Factors Family	PHD

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0008080	molecular_function	N-acetyltransferase activity

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	10.497
	SRR3591706	second leaf	12.208
	SRR3591707	mature leaf	3.790
	SRR3591708	Shoot apex	13.833
	SRR3591709	Stem	4.901
	SRR3591710	White floral bud	6.698
	SRR3591711	White flower	3.971
	SRR3591712	Green floral bud	13.259
	SRR3591713	Yellow flower	0.904
SRP173429	SRR8316895	Juvenile bud stage	8.592
	SRR8316896	Juvenile bud stage	8.649
	SRR8316897	Juvenile bud stage	3.893
	SRR8316894	Third green stage	4.174
	SRR8316900	Third green stage	9.940
	SRR8316901	Third green stage	13.393
	SRR8316898	Complete white stage	2.264
	SRR8316899	Complete white stage	13.983
	SRR8316903	Complete white stage	5.014
	SRR8316902	Silver flowering stage	1.090
	SRR8316904	Silver flowering stage	1.888
	SRR8316905	Silver flowering stage	0.717
	SRR8316906	Gold flowering stage	2.919
	SRR8316907	Gold flowering stage	1.999
	SRR8316908	Gold flowering stage	1.585
SRP132670	SRR6706286	Control	12.333
	SRR6706287	Light intensity 50%	13.540
	SRR6706288	Light intensity 20%	15.810
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	9.691
	CNS0095593	Slightly white alabastrum(diploid) 2	10.269
	CNS0095594	Slightly white alabastrum(diploid) 3	7.779
	CNS0095595	Whole white alabastrum(diploid) 2	7.183
	CNS0095596	Whole white alabastrum(diploid) 3	5.043
	CNS0095597	Whole white alabastrum(diploid) 4	7.602
	CNS0095598	Silvery flower (diploied) 1	9.208
	CNS0095599	Silvery flower (diploied) 2	8.632
	CNS0095600	Silvery flower (diploied) 3	3.243
	CNS0095601	Golden flower (diploid) 1	9.848
	CNS0095602	Golden flower (diploid) 2	4.487
	CNS0095603	Golden flower (diploid) 3	4.185
	CNS0095604	Slightly white alabastrum(tetraploid) 1	7.656
	CNS0095605	Slightly white alabastrum(tetraploid) 2	5.943
	CNS0095606	Slightly white alabastrum(tetraploid) 3	14.805
	CNS0095607	Whole white alabastrum(tetraploid) 1	5.175
	CNS0095608	Whole white alabastrum(tetraploid) 2	3.622
	CNS0095609	Whole white alabastrum(tetraploid) 3	9.771
	CNS0095610	Silvery flower (tetraploid) 1	1.434
	CNS0095611	Silvery flower (tetraploid) 2	2.053
	CNS0095612	Silvery flower (tetraploid) 3	1.310
	CNS0095613	Golden flower (tetraploid) 1	0.330
	CNS0095614	Golden flower (tetraploid) 2	0.679
	CNS0095615	Golden flower (tetraploid) 3	0.754
CRA001975	CRR073297	Stem 1	10.737
	CRR073298	Stem 2	9.766
	CRR073299	Stem 3	10.138
	CRR073300	Leaf 1	14.736
	CRR073301	Leaf 2	10.154
	CRR073302	Leaf 3	10.085
	CRR073303	Juvenile bud 1	6.973
	CRR073304	Juvenile bud 2	8.868
	CRR073305	Juvenile bud 3	9.699
	CRR073306	Third green 1	0.514
	CRR073307	Third green 2	0.689
	CRR073308	Third green 3	0.531
	CRR073309	Second white 1	0.194
	CRR073310	Second white 2	0.788
	CRR073311	Second white 3	0.877
	CRR073312	Silver flowering 1	0.367
	CRR073313	Silver flowering 2	0.230
	CRR073314	Silver flowering 3	0.552
	CRR073315	Gold flowering 1	6.664
	CRR073316	Gold flowering 2	10.805
	CRR073317	Gold flowering 3	9.127
	CRR073318	Tawny withering 1	14.323
	CRR073319	Tawny withering 2	11.487
	CRR073320	Tawny withering 3	14.340