Gene detail

Detail information of GWHGAAZE009321

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	ACR09746.1	0	DIV1A protein [Heptacodium miconioides]
Swissprot	tr\|Q8S9H7\|DIV_ANTMA	1E-134	Transcription factor DIVARICATA
trEMBL	tr\|C5I9W0\|C5I9W0_9DIPS	0	DIV1A protein {ECO:0000313\|EMBL:ACR09746.1}
TAIR10	AT5G58900.1	2E-72	Homeodomain-like transcriptional regulator

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000002	gene	107745011	107746700	+
GWHAAZE00000002	mRNA	107745011	107746700	+
GWHAAZE00000002	exon	107745011	107745438	+
GWHAAZE00000002	exon	107746208	107746700	+
GWHAAZE00000002	CDS	107745011	107745438	+
GWHAAZE00000002	CDS	107746208	107746700	+

Transcript Sequence
>GWHTAAZE009331 ATGAGGTGGGGTATGGAAATTTTGTCACCAGTCTCTTACCATTCGAATTCAAGCTATTTGCTCGAAGAAAGCAAGAGTACAAGGTGGACAACAGTAGAGAACAAGCTGTTTGAGAATGCTCTTGCGAAATTTGATAAGGAAACACCGGACCGGTGGCAGAAAGTGGCGGCGATGGTGCCGGGGAAGACGGTGGAGGATGTGATGAAGCAATATAAGGAATTGGAGGATGATGTGAGCAGTATTGAAGCTGGGCTAGTTCCAATTCCTGGTTATAATACTAATACTAATACTTCTCCTTTTACACTTGAGTGGGGGAATAACTTTCATGGCTTTGATGGTTACAAGCCTGGAGGGAAGAGATCCTCATCTGCTAGGCCTTGTGAACAAGAAAGGAAAAAGGGTGTTCCATGGACTGAGGAAGAGCATAAATTGTTTCTCTTGGGGCTAAAAAAGTACGGAAAGGGGGACTGGAGAAATATCTCCCGGAATTTTGTTATCACAAGAACACCGACTCAAGTGGCTAGCCATGCTCAAAAGTATTTCATTAGGCAGCTTTCGGGTGGGAAAGATAAGAGAAGAGCAAGTATCCACGATATAACTACAGTCAATCTCAACGAAAATCAAATTCCCCAAGAAGAGAAAAGGGTTCCTTCACCGGAAGAGCACTCTACCGGCCTATCCCAACAGCCAAAAACGGCAACATCTTTCAAGTGGAATCAGCCAAACATTGGAAAAGTAGCCATGGATTTCAACCAAACACATGAAAATATGTTCATTTCGCCTCCTTACGGGGTACTAAACTCATATGGGCTTAAAATGCAGGTCCAAAATCAACAAAGAAATGGCGTACATGAATCTTTTCTTGGACCGCAGAGTATGGTTTTTCAGATGCAACCTGCAAGGCACTACCCCCATGGATGA

Network for GWHGAAZE009321

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00249.32	Myb_DNA-binding	28	72	9.00E-06
PF00249.32	Myb_DNA-binding	136	180	1.50E-12

Protein Sequence

Gene family

Gene family	subfamily
Transcription Factors Family	MYB

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0003677	molecular_function	DNA binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	10.677
	SRR3591706	second leaf	10.543
	SRR3591707	mature leaf	14.828
	SRR3591708	Shoot apex	16.233
	SRR3591709	Stem	21.459
	SRR3591710	White floral bud	11.868
	SRR3591711	White flower	10.285
	SRR3591712	Green floral bud	21.898
	SRR3591713	Yellow flower	3.613
SRP173429	SRR8316895	Juvenile bud stage	8.457
	SRR8316896	Juvenile bud stage	9.176
	SRR8316897	Juvenile bud stage	2.256
	SRR8316894	Third green stage	6.826
	SRR8316900	Third green stage	19.985
	SRR8316901	Third green stage	16.722
	SRR8316898	Complete white stage	9.792
	SRR8316899	Complete white stage	38.272
	SRR8316903	Complete white stage	14.390
	SRR8316902	Silver flowering stage	4.703
	SRR8316904	Silver flowering stage	5.768
	SRR8316905	Silver flowering stage	4.140
	SRR8316906	Gold flowering stage	4.868
	SRR8316907	Gold flowering stage	3.476
	SRR8316908	Gold flowering stage	5.633
SRP132670	SRR6706286	Control	13.199
	SRR6706287	Light intensity 50%	14.985
	SRR6706288	Light intensity 20%	16.101
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	14.191
	CNS0095593	Slightly white alabastrum(diploid) 2	15.804
	CNS0095594	Slightly white alabastrum(diploid) 3	10.831
	CNS0095595	Whole white alabastrum(diploid) 2	16.029
	CNS0095596	Whole white alabastrum(diploid) 3	11.823
	CNS0095597	Whole white alabastrum(diploid) 4	13.791
	CNS0095598	Silvery flower (diploied) 1	16.342
	CNS0095599	Silvery flower (diploied) 2	7.483
	CNS0095600	Silvery flower (diploied) 3	8.507
	CNS0095601	Golden flower (diploid) 1	9.100
	CNS0095602	Golden flower (diploid) 2	5.782
	CNS0095603	Golden flower (diploid) 3	6.424
	CNS0095604	Slightly white alabastrum(tetraploid) 1	23.706
	CNS0095605	Slightly white alabastrum(tetraploid) 2	18.051
	CNS0095606	Slightly white alabastrum(tetraploid) 3	42.206
	CNS0095607	Whole white alabastrum(tetraploid) 1	19.410
	CNS0095608	Whole white alabastrum(tetraploid) 2	17.913
	CNS0095609	Whole white alabastrum(tetraploid) 3	18.606
	CNS0095610	Silvery flower (tetraploid) 1	15.011
	CNS0095611	Silvery flower (tetraploid) 2	15.705
	CNS0095612	Silvery flower (tetraploid) 3	18.452
	CNS0095613	Golden flower (tetraploid) 1	6.073
	CNS0095614	Golden flower (tetraploid) 2	8.773
	CNS0095615	Golden flower (tetraploid) 3	4.859
CRA001975	CRR073297	Stem 1	16.758
	CRR073298	Stem 2	15.302
	CRR073299	Stem 3	14.554
	CRR073300	Leaf 1	20.571
	CRR073301	Leaf 2	13.715
	CRR073302	Leaf 3	12.614
	CRR073303	Juvenile bud 1	16.654
	CRR073304	Juvenile bud 2	14.135
	CRR073305	Juvenile bud 3	25.254
	CRR073306	Third green 1	3.852
	CRR073307	Third green 2	4.764
	CRR073308	Third green 3	4.231
	CRR073309	Second white 1	5.173
	CRR073310	Second white 2	2.993
	CRR073311	Second white 3	3.346
	CRR073312	Silver flowering 1	1.064
	CRR073313	Silver flowering 2	0.975
	CRR073314	Silver flowering 3	0.880
	CRR073315	Gold flowering 1	1.712
	CRR073316	Gold flowering 2	4.473
	CRR073317	Gold flowering 3	6.670
	CRR073318	Tawny withering 1	3.242
	CRR073319	Tawny withering 2	5.159
	CRR073320	Tawny withering 3	4.298