Detail information of GWHGAAZE009277


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_011089797.12.997E-132PREDICTED: methylsterol monooxygenase 2-2 [Sesamum indicum]
Swissprottr|Q8VWZ8|SMO22_ARATH8E-128Methylsterol monooxygenase 2-2
trEMBLtr|A0A068ULK0|A0A068ULK0_COFCA1E-131Coffea canephora DH200=94 genomic scaffold, scaffold_36 {ECO:0000313|EMBL:CDP09109.1}
TAIR10AT1G07420.29E-102sterol 4-alpha-methyl-oxidase 2-1

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene106997338106998330-
GWHAAZE00000002mRNA106997338106998330-
GWHAAZE00000002exon106997338106997422-
GWHAAZE00000002exon106997534106997746-
GWHAAZE00000002exon106997853106997972-
GWHAAZE00000002exon106998179106998330-
GWHAAZE00000002CDS106998179106998330-
GWHAAZE00000002CDS106997853106997972-
GWHAAZE00000002CDS106997534106997746-
GWHAAZE00000002CDS106997338106997422-
Transcript Sequence

Network for GWHGAAZE009277

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04116.14FA_hydroxylase591892.40E-26
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K14424SMO2 Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Steroid biosynthesismap00100

Gene Ontology

GO term OntologyName
GO:0008610biological_processlipid biosynthetic process
GO:0055114biological_processoxidation-reduction process
GO:0005506molecular_functioniron ion binding
GO:0016491molecular_functionoxidoreductase activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf83.845
SRR3591706second leaf78.757
SRR3591707mature leaf40.068
SRR3591708Shoot apex80.681
SRR3591709Stem35.787
SRR3591710White floral bud20.808
SRR3591711White flower11.088
SRR3591712Green floral bud43.895
SRR3591713Yellow flower1.731
SRP173429 SRR8316895Juvenile bud stage 38.647
SRR8316896Juvenile bud stage 51.323
SRR8316897Juvenile bud stage 28.164
SRR8316894Third green stage 21.215
SRR8316900Third green stage 67.717
SRR8316901Third green stage 57.321
SRR8316898Complete white stage 9.803
SRR8316899Complete white stage 68.943
SRR8316903Complete white stage 16.615
SRR8316902Silver flowering stage1.269
SRR8316904Silver flowering stage3.259
SRR8316905Silver flowering stage0.712
SRR8316906Gold flowering stage 1.654
SRR8316907Gold flowering stage 3.469
SRR8316908Gold flowering stage 4.155
SRP132670SRR6706286Control54.945
SRR6706287Light intensity 50%59.028
SRR6706288Light intensity 20%67.507
CNP0000432CNS0095592Slightly white alabastrum(diploid) 165.378
CNS0095593Slightly white alabastrum(diploid) 290.345
CNS0095594Slightly white alabastrum(diploid) 360.246
CNS0095595Whole white alabastrum(diploid) 271.450
CNS0095596Whole white alabastrum(diploid) 370.017
CNS0095597Whole white alabastrum(diploid) 458.014
CNS0095598Silvery flower (diploied) 129.428
CNS0095599Silvery flower (diploied) 229.430
CNS0095600Silvery flower (diploied) 314.326
CNS0095601Golden flower (diploid) 123.155
CNS0095602Golden flower (diploid) 213.306
CNS0095603Golden flower (diploid) 314.858
CNS0095604Slightly white alabastrum(tetraploid) 184.388
CNS0095605Slightly white alabastrum(tetraploid) 285.506
CNS0095606Slightly white alabastrum(tetraploid) 3132.320
CNS0095607Whole white alabastrum(tetraploid) 137.198
CNS0095608Whole white alabastrum(tetraploid) 237.268
CNS0095609Whole white alabastrum(tetraploid) 383.365
CNS0095610Silvery flower (tetraploid) 112.406
CNS0095611Silvery flower (tetraploid) 217.214
CNS0095612Silvery flower (tetraploid) 38.163
CNS0095613Golden flower (tetraploid) 13.834
CNS0095614Golden flower (tetraploid) 27.675
CNS0095615Golden flower (tetraploid) 31.072
CRA001975CRR073297Stem 156.960
CRR073298Stem 251.324
CRR073299Stem 355.771
CRR073300Leaf 165.012
CRR073301Leaf 255.964
CRR073302Leaf 379.060
CRR073303Juvenile bud 166.730
CRR073304Juvenile bud 247.480
CRR073305Juvenile bud 358.734
CRR073306Third green 11.513
CRR073307Third green 24.239
CRR073308Third green 34.585
CRR073309Second white 10.234
CRR073310Second white 20.568
CRR073311Second white 30.248
CRR073312Silver flowering 10.021
CRR073313Silver flowering 20.452
CRR073314Silver flowering 30.000
CRR073315Gold flowering 153.651
CRR073316Gold flowering 256.629
CRR073317Gold flowering 343.635
CRR073318Tawny withering 147.342
CRR073319Tawny withering 232.350
CRR073320Tawny withering 345.019