Gene detail

Detail information of GWHGAAZE009093

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_002282519.2	1.0748E-133	PREDICTED: BEL1-like homeodomain protein 9 [Vitis vinifera]
Swissprot	tr\|Q9SJJ3\|BLH8_ARATH	2E-58	BEL1-like homeodomain protein 8
trEMBL	tr\|A5AWN3\|A5AWN3_VITVI	2E-133	Putative uncharacterized protein {ECO:0000313\|EMBL:CAN62927.1}
TAIR10	AT2G27990.1	8E-48	BEL1-like homeodomain 8

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000002	gene	101983909	101986024	+
GWHAAZE00000002	mRNA	101983909	101986024	+
GWHAAZE00000002	exon	101983909	101984261	+
GWHAAZE00000002	exon	101984648	101984708	+
GWHAAZE00000002	exon	101985533	101986024	+
GWHAAZE00000002	CDS	101983909	101984261	+
GWHAAZE00000002	CDS	101984648	101984708	+
GWHAAZE00000002	CDS	101985533	101986024	+

Transcript Sequence
>GWHTAAZE009103 ATGCAAATGGTGGTATCCTCCTTCGAGTCAGTAGCGGGTCTTAGTACAGCCACCCCTTACATTTCGCAGGCTCTGAAGGCAGTCTCAAGGCACTTCCGGTGCCTGAAGAACGCAATTTCAGACCAACTCAGGCACATAAAGAAATCACTGGGAGAGGAATTGGCATCACGCACCACCGGTACAAGCACTAGCAAAGGAGATACGAGCACTTCGAGGCTAAAATTTGTGGACAACAGCAGCTTTCAAAAGTACAAATCTGGTGGGACTGGCCTTGGATTCTTTGAACCCCAACAGCCTGTTTGGAGGCCCCAGCGAGGCCTACCGGAACGTGCTGTGTCTGTTCTTCGTGCTTGGTACCCAACTGATACGGACAAGCATATGCTAGCTACTCAAACTGGCCTAACTCGGAACCAAGTCTCGAATTGGTTCATCAATGCCCGAGTCCGTGTTTGGAAACCCATGGTGGAAGAAATACACACACTAGAAACCAAAGGGTTGGCAGAGCAGAACCCTAACGCTGCCAGAGCTGACCCCAAACCGCCATCCGAGGGTGGCAGCCACCCAAGCCATGACCAACCCATGAACCGGTTCCACGTTAGTTCAATGCCCAACGAGCAACTTGAATACTCAGGAATTGGCTCTTCAATAAACACTCGAGACGAACAGGGCCAGGAACTTTGGAAGCGGTCGCGGGTTGAGTGCCAGATACCAGGTCCACCCATGGACGGGTCGTTCATGGGTTTTGTCCCTTACCAACGAGGTGGGCTTGAGATTGGGGGACTTGGAGCCGTTTCACTTACTTTGGGTCTTAGGCAAAGCGCCGAAAGTTCGCAGCAACAATTGCAACAAGAGCATCAAATTAGGCGACATTTTGGAGGTCAAATGATTCATGATTTTGTGGGTTAA

Network for GWHGAAZE009093

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF07526.12	POX	1	40	6.30E-15
PF05920.12	Homeobox_KN	119	149	1.90E-12

Protein Sequence

Gene family

Gene family	subfamily
Transcription Factors Family	HB-BELL

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0006355	biological_process	regulation of transcription, DNA-templated
GO:0003677	molecular_function	DNA binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	43.421
	SRR3591706	second leaf	2.038
	SRR3591707	mature leaf	2.578
	SRR3591708	Shoot apex	13.834
	SRR3591709	Stem	43.684
	SRR3591710	White floral bud	51.281
	SRR3591711	White flower	20.228
	SRR3591712	Green floral bud	18.019
	SRR3591713	Yellow flower	16.393
SRP173429	SRR8316895	Juvenile bud stage	13.637
	SRR8316896	Juvenile bud stage	13.352
	SRR8316897	Juvenile bud stage	7.014
	SRR8316894	Third green stage	7.889
	SRR8316900	Third green stage	19.307
	SRR8316901	Third green stage	19.990
	SRR8316898	Complete white stage	22.516
	SRR8316899	Complete white stage	48.065
	SRR8316903	Complete white stage	34.554
	SRR8316902	Silver flowering stage	10.396
	SRR8316904	Silver flowering stage	11.816
	SRR8316905	Silver flowering stage	5.440
	SRR8316906	Gold flowering stage	15.015
	SRR8316907	Gold flowering stage	18.529
	SRR8316908	Gold flowering stage	19.595
SRP132670	SRR6706286	Control	27.769
	SRR6706287	Light intensity 50%	29.025
	SRR6706288	Light intensity 20%	25.608
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	18.019
	CNS0095593	Slightly white alabastrum(diploid) 2	23.252
	CNS0095594	Slightly white alabastrum(diploid) 3	12.838
	CNS0095595	Whole white alabastrum(diploid) 2	18.470
	CNS0095596	Whole white alabastrum(diploid) 3	9.602
	CNS0095597	Whole white alabastrum(diploid) 4	15.272
	CNS0095598	Silvery flower (diploied) 1	40.268
	CNS0095599	Silvery flower (diploied) 2	31.799
	CNS0095600	Silvery flower (diploied) 3	33.672
	CNS0095601	Golden flower (diploid) 1	33.256
	CNS0095602	Golden flower (diploid) 2	36.299
	CNS0095603	Golden flower (diploid) 3	38.785
	CNS0095604	Slightly white alabastrum(tetraploid) 1	21.583
	CNS0095605	Slightly white alabastrum(tetraploid) 2	13.358
	CNS0095606	Slightly white alabastrum(tetraploid) 3	40.493
	CNS0095607	Whole white alabastrum(tetraploid) 1	15.488
	CNS0095608	Whole white alabastrum(tetraploid) 2	9.874
	CNS0095609	Whole white alabastrum(tetraploid) 3	7.863
	CNS0095610	Silvery flower (tetraploid) 1	16.733
	CNS0095611	Silvery flower (tetraploid) 2	20.217
	CNS0095612	Silvery flower (tetraploid) 3	15.842
	CNS0095613	Golden flower (tetraploid) 1	14.120
	CNS0095614	Golden flower (tetraploid) 2	11.167
	CNS0095615	Golden flower (tetraploid) 3	6.138
CRA001975	CRR073297	Stem 1	18.241
	CRR073298	Stem 2	18.468
	CRR073299	Stem 3	13.128
	CRR073300	Leaf 1	23.295
	CRR073301	Leaf 2	26.161
	CRR073302	Leaf 3	15.104
	CRR073303	Juvenile bud 1	24.851
	CRR073304	Juvenile bud 2	20.019
	CRR073305	Juvenile bud 3	38.748
	CRR073306	Third green 1	23.077
	CRR073307	Third green 2	25.756
	CRR073308	Third green 3	22.861
	CRR073309	Second white 1	7.567
	CRR073310	Second white 2	6.321
	CRR073311	Second white 3	4.823
	CRR073312	Silver flowering 1	4.231
	CRR073313	Silver flowering 2	3.769
	CRR073314	Silver flowering 3	4.423
	CRR073315	Gold flowering 1	0.355
	CRR073316	Gold flowering 2	0.181
	CRR073317	Gold flowering 3	0.542
	CRR073318	Tawny withering 1	35.693
	CRR073319	Tawny withering 2	28.394
	CRR073320	Tawny withering 3	34.329