Detail information of GWHGAAZE008943


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrCDP06863.14.64294E-36unnamed protein product [Coffea canephora]
Swissprottr|Q3EAL1|OFP6_ARATH3E-21Transcription repressor OFP6
trEMBLtr|A0A068UGU7|A0A068UGU7_COFCA2E-36Coffea canephora DH200=94 genomic scaffold, scaffold_24 {ECO:0000313|EMBL:CDP06863.1}
TAIR10AT2G36026.15E-18Ovate family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene9736522297365770-
GWHAAZE00000002mRNA9736522297365770-
GWHAAZE00000002exon9736522297365770-
GWHAAZE00000002CDS9736522297365770-
Transcript Sequence

Network for GWHGAAZE008943

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04844.14Ovate931478.50E-22
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyOFP

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf5.547
SRR3591706second leaf0.420
SRR3591707mature leaf3.192
SRR3591708Shoot apex1.073
SRR3591709Stem2.362
SRR3591710White floral bud0.211
SRR3591711White flower2.093
SRR3591712Green floral bud0.276
SRR3591713Yellow flower8.495
SRP173429 SRR8316895Juvenile bud stage 2.221
SRR8316896Juvenile bud stage 2.883
SRR8316897Juvenile bud stage 1.528
SRR8316894Third green stage 0.163
SRR8316900Third green stage 0.624
SRR8316901Third green stage 2.064
SRR8316898Complete white stage 0.805
SRR8316899Complete white stage 1.301
SRR8316903Complete white stage 0.767
SRR8316902Silver flowering stage2.522
SRR8316904Silver flowering stage0.793
SRR8316905Silver flowering stage1.652
SRR8316906Gold flowering stage 15.051
SRR8316907Gold flowering stage 6.916
SRR8316908Gold flowering stage 9.814
SRP132670SRR6706286Control0.742
SRR6706287Light intensity 50%0.730
SRR6706288Light intensity 20%0.856
CNP0000432CNS0095592Slightly white alabastrum(diploid) 12.053
CNS0095593Slightly white alabastrum(diploid) 21.457
CNS0095594Slightly white alabastrum(diploid) 32.617
CNS0095595Whole white alabastrum(diploid) 21.116
CNS0095596Whole white alabastrum(diploid) 30.377
CNS0095597Whole white alabastrum(diploid) 40.714
CNS0095598Silvery flower (diploied) 14.470
CNS0095599Silvery flower (diploied) 22.961
CNS0095600Silvery flower (diploied) 33.076
CNS0095601Golden flower (diploid) 17.902
CNS0095602Golden flower (diploid) 27.754
CNS0095603Golden flower (diploid) 38.064
CNS0095604Slightly white alabastrum(tetraploid) 10.769
CNS0095605Slightly white alabastrum(tetraploid) 20.095
CNS0095606Slightly white alabastrum(tetraploid) 30.483
CNS0095607Whole white alabastrum(tetraploid) 10.292
CNS0095608Whole white alabastrum(tetraploid) 20.368
CNS0095609Whole white alabastrum(tetraploid) 30.752
CNS0095610Silvery flower (tetraploid) 11.297
CNS0095611Silvery flower (tetraploid) 20.998
CNS0095612Silvery flower (tetraploid) 33.814
CNS0095613Golden flower (tetraploid) 18.142
CNS0095614Golden flower (tetraploid) 28.098
CNS0095615Golden flower (tetraploid) 31.909
CRA001975CRR073297Stem 10.954
CRR073298Stem 21.740
CRR073299Stem 31.413
CRR073300Leaf 11.773
CRR073301Leaf 22.698
CRR073302Leaf 31.020
CRR073303Juvenile bud 10.607
CRR073304Juvenile bud 21.753
CRR073305Juvenile bud 31.415
CRR073306Third green 11.013
CRR073307Third green 21.853
CRR073308Third green 30.676
CRR073309Second white 111.267
CRR073310Second white 29.340
CRR073311Second white 310.957
CRR073312Silver flowering 133.782
CRR073313Silver flowering 235.243
CRR073314Silver flowering 327.350
CRR073315Gold flowering 123.442
CRR073316Gold flowering 218.976
CRR073317Gold flowering 331.751
CRR073318Tawny withering 11.602
CRR073319Tawny withering 25.410
CRR073320Tawny withering 30.653