Gene detail

Detail information of GWHGAAZE008719

Functional Annotation

Database	Orthologs	Annotation
Nr	XP_002273629.1	PREDICTED: abscisic-aldehyde oxidase-like [Vitis vinifera]
Swissprot	tr\|Q7G191\|ALDO4_ARATH	Benzaldehyde dehydrogenase (NAD(+))
trEMBL	tr\|F6HAB3\|F6HAB3_VITVI	Putative uncharacterized protein {ECO:0000313\|EMBL:CCB49192.1}
TAIR10	AT1G04580.1	aldehyde oxidase 4

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000002	gene	89005640	89014662	+
GWHAAZE00000002	mRNA	89005640	89014662	+
GWHAAZE00000002	exon	89005640	89007287	+
GWHAAZE00000002	exon	89008437	89008696	+
GWHAAZE00000002	exon	89008792	89009001	+
GWHAAZE00000002	exon	89009544	89009762	+
GWHAAZE00000002	exon	89010680	89011645	+
GWHAAZE00000002	exon	89012212	89012307	+
GWHAAZE00000002	exon	89012984	89013082	+
GWHAAZE00000002	exon	89013654	89013843	+
GWHAAZE00000002	exon	89014427	89014662	+
GWHAAZE00000002	CDS	89005640	89007287	+
GWHAAZE00000002	CDS	89008437	89008696	+
GWHAAZE00000002	CDS	89008792	89009001	+
GWHAAZE00000002	CDS	89009544	89009762	+
GWHAAZE00000002	CDS	89010680	89011645	+
GWHAAZE00000002	CDS	89012212	89012307	+
GWHAAZE00000002	CDS	89012984	89013082	+
GWHAAZE00000002	CDS	89013654	89013843	+
GWHAAZE00000002	CDS	89014427	89014662	+

Transcript Sequence
>GWHTAAZE008729 ATGTATTTTATGGTCGCAGGTGGTTGTGGTGCTTGTGATGTTCTACTGTCAAAGTATGACCTCGAGCTAAAACAAGTCGAAAATGGCAAAGTGAATTCATGCCTTGCACTTCTTTGCAGCATAAATGGGTGTTCAGTTACTACAACTGAAGGCCTTGGAAATAGCAAAGATGAGTTACACCCGATTCATAAAAGGATGGCTGGTTTTCATGCTTCTCAATGCGGCTTTTGCACTCCTGCGATGTGCATTTCACTCTTCTCGGCGCTTGTCAATGCCAAAAATGCAAATCGACCAGAGCCCCCTCCGGGATTTTCCAAACTTACGGTTTTGGAGGCTGAAAAAGCTATTGTAGGAAATCTCTGTCGATGCACTGGCTATCGACCCATTGCTGATACCTGCAAAAGTTTTGCTGCTGATGTTGATATAGAGGACTTAGGGATCAATTCTTTCTGGAAAAAGGGGGATAGTATTGAAGATAAAATTAGTAAGTTACCTTTCTATGATCCCAATGACGAAATTTGTACATATCCTGAATTCTTGAAAAATGAATCTAAGCCACTGAACTTTAAAAGTCAATCTTGGTCTACTCCTCTTACTATTGAAGAGCTTCAGAGCTTGTTGGAAGTAAATTTGGCAGGAAGTGGTACAAAGATAAAGTTAGGTGTCGGTAACACATTGACAGGTTATTATAAGGATCTGGAGCACTATGGCAAATACATTGACTTGAGGTATATCCCTGAGCTCTCATTGATTCGAAGGGATCACACAGGGATTGAAATTGGTGCAACTGTACCGATTTTGAAAGCTATTTTAGCTCTAAGGGAAGAACACGAAGTCAAGTTATGCTCCGAAGCCGAGTTGGTGTTTCAAAAAATTGCTAACCACATGGAGAGGGTTGCTTCAGGGTCCATTCGAAATTTCGCTAGTGTAGGGGGGAATTTGGTGATTGCACAAAGGAGATATTTTCCTTCGGATATTGCGACAATATTTCTTGCAGTAGACTCAATAGTTAGTATAATCACGGGTCAAAAGCACGAAAAGCTTACGTTTGAGGAGTTCTTGTGGCGGCCACCTTTGGACTCCAAAAGTGTGCTTTTGAGTGTCAAAATTCCATGTTGGAAGCCAGAAAGAAAGGGTTTATCTTCGGAAACAGAGACCAAGTTGCTTTTTGAAACTTATCGTGCTTCTCCTCGGCCCCTTGGAAATGCGTTGCCCTTTTTAAATGCTGCTTTCTTGGCTGATATTTCATCTTCTAAAACTGGAGTTTTAGTAAATAATATTCGCCTGGCTTTCGGTGCTTATGGGACTAAACATGCAAAAAGGGCAAGAAAGGTTGAAGAATATCTAGCTGGGAAAGTGCTAAGTTTTGGCGTTCTTTATGAAGCTGTTAAATTAGTTAAGGCTGCTGTAGTACCCGAACATGGTACTTCAGACCCTGCCTACCGGTCAAGCTTGGCTGTTGGGTTTCTTTGTGAATTTCTTCTTCCCTTGATTGATCCTGATTCTGTAACTTCTGATCCTTACGAGTTTGATGATGTTGGAAACCCGGGATTGGTTTCATCTGCAAAACAGGTGATCGAGCCAAGCAGAGAGTACTATCCGGTCGGTAAACCAATCATGAAATCTGGTGCTGCCCTCCAAGCTTCTGGTGAAGCTATTTATGTGGATGATATTCCTTCGCCAGAAAATTGCCTTCACGGAGCATTTATTCACAGCACCAAGCCTTTGGCATGGGTAAAGGATGTCAAATTCGAGTCTAAGTCTCTACCGGATGGAGTAACTGATATTATTTCGTTTAAAGATATCCCAAAAGGAGGAGAGAACATAGGAAGCAACACCGTATATGGTGATGAACCTTTATTTGCTGATGCTATTACAAGCTATGCTGGCCAACCAGTTGCTTTTGTGGTGGCAGATAAACAGAAGCATGCAGATGTGGGTGCTGCAATGGCCATCATCGATTACGACACTGAAGGCTTAGGACCACCTATTTTAACAGTTGAAGAGGCTTTTGAAAGATCATGCTTTTTTGAGGTCCCTTCTGATATGTATCCAGCACAGGTTGGTGATTTCTCGAAAGGAATGTCTGAAGCAGATCACAAAATTCTCTCTGCTGAGATTAGACTTGGGTCGCAGTACTTTTTCTATATGGAAACACAAACTGCCCTTGCCATTCCAGATGAAGACAACTGCATGGTGGTTTACAGTTCAAGTCAGTGCCCCGAGAACGTGCATACTGTTATTGCAAGGTGTCTTGGTATTCCAGAACATAATGTTCGTGTAATTACGAGAAGAGTTGGAGGAGGCTTTGGTGGAAAGGTCTCAAAATCTATGCCTATTGCTGCAGCATCTGCACTTGCAGCACACAAATTACGACGCCCTGTCCGTATATATGTCAATAGGAAGTCCGATATGTTGATGGCAGGAGGAAGACATCCTATGAAGATAACATACAGTGTTGGCTTCAAATCTAACAGGAAGATCACGGCCTTACACCTTGATATTTTAATCAATTCGGGGATAGTTATAGATTTAAGCCCCGTAGTGCCAGGGACCATGCTAGGTTCACTTAAGAAGTACGATTGGGGTGCTTTATCTTTCAATATAAAGTTATGCAAAACAAATACTAGCGCTAAAACCACTATGCGGGGTCCTGGGGAGGTGAATGCAACTTTTCTCGCAGAAGCTATAATAGAACGTGTGGCATCTACACTTTCAATGGAAGTAGATTTTATTAGAACAAAAAATCTTCACACGTACGAAAGCCTCAGCTTTTTTTATGAAGGCAGCGCAGGGGAGCCTCAAGAGTATACTTTGCCTTCCATAATGGATAAGTTGGCAAGTACATCAAGCTTTGAAAAACGGATTGAAATGACAGAAGAGTATAATTTGTGTGATAAATGGCGAAAAAAGGGTATTTCACGGGTACCCATTATTCATCAATGTACACTGCAACCAATCCCGGCGAAAGTAAGCATTCTTTGGGATGGATCTGTTGCAGTAGAAGTTGGTGGGATTGAGCTAGGCCAGGGGTTGTGGACTAAAGTAAAACAGATGACTGCATATGCTTTAAGTTTGATTCAATGTGACGGAACTGAAGACCTCTTGGATAAAGTACGGGTCATACAAGCAGACACTTTGAGCTTAGTACAAGGTGGGTTTACTGCTGAGAGCTCTACATCTGAATCAAGCTGTGGGGCAGCTAGAGTTTGCTGCGACATTTTGGTTGGAAGATTAGCCCCTCTGAAGGAAAAGTTGCAAAAGCAAATGGGTTCTGTTACATGGGATGACATTATTCTTCAGGCACATTCTGAAAATGTAAATTTATCAGCAAGTACTTACCTTGTACCTGACTCAGATTCAATGCGTTACCTGAACTATGGTGCTGCTGTGAGTGAGGTGGAAGTAAATATTCTTACTGGAGAAACCAGAATTTTGCGATCAGATATTATTTATGACTGCGGACAAAGCCTCAACCCTGCTGTGGATTTAGGACAGATTGAAGGCGCTTTTGTACAAGGCATTGGATTCTTTATGTCCGAAGAGTACCTTTCAAATTCAGATGGAATGGTGGTTACAGTGGGCACATGGACATACGAAATACCAACAATCGACACCATTCCCAAACAGTTCAATGTGGAGGTACTCAACAGCGGGCATCACAAAAAACGCGTTCTCTCCTCAAAAGCTTCGGGTGAGCCACCATTACTTCTGGCAGTCTCAGTTCACTGTGCAACAAGAGCAGCCATTAAAGAAGCAAGAAAGCAGCTTCGTTCTTGGGGCGGATTAGAGGGTTCTGATTCAGAATCGACATTATTCAACTTAGAGGTTCCTGCTACTATGCCTGTTGTCAAGCAACTCTGTGGACTCAACAGTGTGGAGAAGTACTTGCAGTTTTGCGCTTCTCCATCAGATTCAACATAG

Network for GWHGAAZE008719

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF01799.21	Fer2_2	48	133	4.10E-21
PF00941.22	FAD_binding_5	193	373	1.50E-30
PF03450.18	CO_deh_flav_C	392	495	6.30E-20
PF01315.23	Ald_Xan_dh_C	549	657	3.20E-27
PF02738.19	Ald_Xan_dh_C2	679	1208	2.30E-157

Protein Sequence

>GWHPAAZE008724
MYFMVAGGCGACDVLLSKYDLELKQVENGKVNSCLALLCSINGCSVTTTEGLGNSKDELHPIHKRMAGFHASQCGFCTPAMCISLFSALVNAKNANRPEPPPGFSKLTVLEAEKAIVGNLCRCTGYRPIADTCKSFAADVDIEDLGINSFWKKGDSIEDKISKLPFYDPNDEICTYPEFLKNESKPLNFKSQSWSTPLTIEELQSLLEVNLAGSGTKIKLGVGNTLTGYYKDLEHYGKYIDLRYIPELSLIRRDHTGIEIGATVPILKAILALREEHEVKLCSEAELVFQKIANHMERVASGSIRNFASVGGNLVIAQRRYFPSDIATIFLAVDSIVSIITGQKHEKLTFEEFLWRPPLDSKSVLLSVKIPCWKPERKGLSSETETKLLFETYRASPRPLGNALPFLNAAFLADISSSKTGVLVNNIRLAFGAYGTKHAKRARKVEEYLAGKVLSFGVLYEAVKLVKAAVVPEHGTSDPAYRSSLAVGFLCEFLLPLIDPDSVTSDPYEFDDVGNPGLVSSAKQVIEPSREYYPVGKPIMKSGAALQASGEAIYVDDIPSPENCLHGAFIHSTKPLAWVKDVKFESKSLPDGVTDIISFKDIPKGGENIGSNTVYGDEPLFADAITSYAGQPVAFVVADKQKHADVGAAMAIIDYDTEGLGPPILTVEEAFERSCFFEVPSDMYPAQVGDFSKGMSEADHKILSAEIRLGSQYFFYMETQTALAIPDEDNCMVVYSSSQCPENVHTVIARCLGIPEHNVRVITRRVGGGFGGKVSKSMPIAAASALAAHKLRRPVRIYVNRKSDMLMAGGRHPMKITYSVGFKSNRKITALHLDILINSGIVIDLSPVVPGTMLGSLKKYDWGALSFNIKLCKTNTSAKTTMRGPGEVNATFLAEAIIERVASTLSMEVDFIRTKNLHTYESLSFFYEGSAGEPQEYTLPSIMDKLASTSSFEKRIEMTEEYNLCDKWRKKGISRVPIIHQCTLQPIPAKVSILWDGSVAVEVGGIELGQGLWTKVKQMTAYALSLIQCDGTEDLLDKVRVIQADTLSLVQGGFTAESSTSESSCGAARVCCDILVGRLAPLKEKLQKQMGSVTWDDIILQAHSENVNLSASTYLVPDSDSMRYLNYGAAVSEVEVNILTGETRILRSDIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMSEEYLSNSDGMVVTVGTWTYEIPTIDTIPKQFNVEVLNSGHHKKRVLSSKASGEPPLLLAVSVHCATRAAIKEARKQLRSWGGLEGSDSESTLFNLEVPATMPVVKQLCGLNSVEKYLQFCASPSDST

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K09842	AAO3	Metabolic pathways	map01100
		Biosynthesis of secondary metabolites	map01110
		Carotenoid biosynthesis	map00906

Gene Ontology

GO term	Ontology	Name
GO:0055114	biological_process	oxidation-reduction process
GO:0016491	molecular_function	oxidoreductase activity
GO:0071949	molecular_function	FAD binding
GO:0050660	molecular_function	flavin adenine dinucleotide binding
GO:0046872	molecular_function	metal ion binding
GO:0009055	molecular_function	electron transfer activity
GO:0051536	molecular_function	iron-sulfur cluster binding
GO:0005506	molecular_function	iron ion binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	3.736
	SRR3591706	second leaf	21.733
	SRR3591707	mature leaf	11.216
	SRR3591708	Shoot apex	15.776
	SRR3591709	Stem	1.589
	SRR3591710	White floral bud	19.251
	SRR3591711	White flower	13.614
	SRR3591712	Green floral bud	13.318
	SRR3591713	Yellow flower	37.697
SRP173429	SRR8316895	Juvenile bud stage	3.458
	SRR8316896	Juvenile bud stage	4.817
	SRR8316897	Juvenile bud stage	1.743
	SRR8316894	Third green stage	1.888
	SRR8316900	Third green stage	5.375
	SRR8316901	Third green stage	5.922
	SRR8316898	Complete white stage	6.395
	SRR8316899	Complete white stage	8.475
	SRR8316903	Complete white stage	15.809
	SRR8316902	Silver flowering stage	5.078
	SRR8316904	Silver flowering stage	10.279
	SRR8316905	Silver flowering stage	4.853
	SRR8316906	Gold flowering stage	14.851
	SRR8316907	Gold flowering stage	19.525
	SRR8316908	Gold flowering stage	7.034
SRP132670	SRR6706286	Control	7.694
	SRR6706287	Light intensity 50%	9.085
	SRR6706288	Light intensity 20%	9.783
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	1.405
	CNS0095593	Slightly white alabastrum(diploid) 2	0.822
	CNS0095594	Slightly white alabastrum(diploid) 3	1.695
	CNS0095595	Whole white alabastrum(diploid) 2	1.080
	CNS0095596	Whole white alabastrum(diploid) 3	0.996
	CNS0095597	Whole white alabastrum(diploid) 4	1.441
	CNS0095598	Silvery flower (diploied) 1	5.137
	CNS0095599	Silvery flower (diploied) 2	3.707
	CNS0095600	Silvery flower (diploied) 3	24.531
	CNS0095601	Golden flower (diploid) 1	4.148
	CNS0095602	Golden flower (diploid) 2	25.491
	CNS0095603	Golden flower (diploid) 3	23.163
	CNS0095604	Slightly white alabastrum(tetraploid) 1	0.413
	CNS0095605	Slightly white alabastrum(tetraploid) 2	0.264
	CNS0095606	Slightly white alabastrum(tetraploid) 3	1.574
	CNS0095607	Whole white alabastrum(tetraploid) 1	0.210
	CNS0095608	Whole white alabastrum(tetraploid) 2	0.110
	CNS0095609	Whole white alabastrum(tetraploid) 3	1.290
	CNS0095610	Silvery flower (tetraploid) 1	14.204
	CNS0095611	Silvery flower (tetraploid) 2	9.530
	CNS0095612	Silvery flower (tetraploid) 3	8.192
	CNS0095613	Golden flower (tetraploid) 1	17.172
	CNS0095614	Golden flower (tetraploid) 2	12.546
	CNS0095615	Golden flower (tetraploid) 3	36.012
CRA001975	CRR073297	Stem 1	5.297
	CRR073298	Stem 2	5.414
	CRR073299	Stem 3	2.957
	CRR073300	Leaf 1	6.173
	CRR073301	Leaf 2	4.221
	CRR073302	Leaf 3	4.366
	CRR073303	Juvenile bud 1	1.590
	CRR073304	Juvenile bud 2	6.208
	CRR073305	Juvenile bud 3	2.733
	CRR073306	Third green 1	0.474
	CRR073307	Third green 2	0.226
	CRR073308	Third green 3	0.275
	CRR073309	Second white 1	0.267
	CRR073310	Second white 2	0.874
	CRR073311	Second white 3	1.522
	CRR073312	Silver flowering 1	1.295
	CRR073313	Silver flowering 2	1.584
	CRR073314	Silver flowering 3	1.188
	CRR073315	Gold flowering 1	0.509
	CRR073316	Gold flowering 2	1.093
	CRR073317	Gold flowering 3	0.185
	CRR073318	Tawny withering 1	0.340
	CRR073319	Tawny withering 2	0.616
	CRR073320	Tawny withering 3	0.539