Detail information of GWHGAAZE008704


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002273629.10PREDICTED: abscisic-aldehyde oxidase-like [Vitis vinifera]
Swissprottr|Q7G191|ALDO4_ARATH0Benzaldehyde dehydrogenase (NAD(+))
trEMBLtr|F6HAB3|F6HAB3_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CCB49192.1}
TAIR10AT1G04580.10aldehyde oxidase 4

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene8851492188533737+
GWHAAZE00000002mRNA8851492188533737+
GWHAAZE00000002exon8851492188515071+
GWHAAZE00000002exon8852222788523855+
GWHAAZE00000002exon8852582088526079+
GWHAAZE00000002exon8852617588526384+
GWHAAZE00000002exon8852767588527893+
GWHAAZE00000002exon8852950488530469+
GWHAAZE00000002exon8853120988531304+
GWHAAZE00000002exon8853196188532059+
GWHAAZE00000002exon8853271188532900+
GWHAAZE00000002exon8853350288533737+
GWHAAZE00000002CDS8851492188515071+
GWHAAZE00000002CDS8852222788523855+
GWHAAZE00000002CDS8852582088526079+
GWHAAZE00000002CDS8852617588526384+
GWHAAZE00000002CDS8852767588527893+
GWHAAZE00000002CDS8852950488530469+
GWHAAZE00000002CDS8853120988531304+
GWHAAZE00000002CDS8853196188532059+
GWHAAZE00000002CDS8853271188532900+
GWHAAZE00000002CDS8853350288533737+
Transcript Sequence

Network for GWHGAAZE008704

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00111.28Fer214811.00E-07
PF01799.21Fer2_2921771.40E-20
PF00941.22FAD_binding_52374171.70E-34
PF03450.18CO_deh_flav_C4365391.40E-20
PF01315.23Ald_Xan_dh_C5937012.10E-27
PF02738.19Ald_Xan_dh_C272812521.80E-158
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K09842AAO3 Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Carotenoid biosynthesismap00906

Gene Ontology

GO term OntologyName
GO:0055114biological_processoxidation-reduction process
GO:0009055molecular_functionelectron transfer activity
GO:0051536molecular_functioniron-sulfur cluster binding
GO:0050660molecular_functionflavin adenine dinucleotide binding
GO:0051537molecular_function2 iron, 2 sulfur cluster binding
GO:0016491molecular_functionoxidoreductase activity
GO:0071949molecular_functionFAD binding
GO:0005506molecular_functioniron ion binding
GO:0046872molecular_functionmetal ion binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf1.211
SRR3591706second leaf5.488
SRR3591707mature leaf0.975
SRR3591708Shoot apex8.352
SRR3591709Stem0.445
SRR3591710White floral bud3.371
SRR3591711White flower32.096
SRR3591712Green floral bud0.740
SRR3591713Yellow flower112.635
SRP173429 SRR8316895Juvenile bud stage 1.114
SRR8316896Juvenile bud stage 1.329
SRR8316897Juvenile bud stage 0.272
SRR8316894Third green stage 0.292
SRR8316900Third green stage 0.450
SRR8316901Third green stage 0.565
SRR8316898Complete white stage 1.938
SRR8316899Complete white stage 0.660
SRR8316903Complete white stage 4.068
SRR8316902Silver flowering stage4.890
SRR8316904Silver flowering stage6.733
SRR8316905Silver flowering stage2.149
SRR8316906Gold flowering stage 9.726
SRR8316907Gold flowering stage 18.750
SRR8316908Gold flowering stage 2.079
SRP132670SRR6706286Control1.194
SRR6706287Light intensity 50%1.253
SRR6706288Light intensity 20%0.857
CNP0000432CNS0095592Slightly white alabastrum(diploid) 10.758
CNS0095593Slightly white alabastrum(diploid) 20.679
CNS0095594Slightly white alabastrum(diploid) 30.738
CNS0095595Whole white alabastrum(diploid) 20.828
CNS0095596Whole white alabastrum(diploid) 30.342
CNS0095597Whole white alabastrum(diploid) 40.423
CNS0095598Silvery flower (diploied) 13.894
CNS0095599Silvery flower (diploied) 22.727
CNS0095600Silvery flower (diploied) 323.945
CNS0095601Golden flower (diploid) 14.282
CNS0095602Golden flower (diploid) 227.452
CNS0095603Golden flower (diploid) 327.206
CNS0095604Slightly white alabastrum(tetraploid) 11.659
CNS0095605Slightly white alabastrum(tetraploid) 22.151
CNS0095606Slightly white alabastrum(tetraploid) 31.377
CNS0095607Whole white alabastrum(tetraploid) 11.980
CNS0095608Whole white alabastrum(tetraploid) 21.680
CNS0095609Whole white alabastrum(tetraploid) 31.819
CNS0095610Silvery flower (tetraploid) 1145.015
CNS0095611Silvery flower (tetraploid) 236.529
CNS0095612Silvery flower (tetraploid) 345.187
CNS0095613Golden flower (tetraploid) 144.524
CNS0095614Golden flower (tetraploid) 263.171
CNS0095615Golden flower (tetraploid) 348.156
CRA001975CRR073297Stem 10.792
CRR073298Stem 20.695
CRR073299Stem 30.613
CRR073300Leaf 10.442
CRR073301Leaf 20.156
CRR073302Leaf 30.333
CRR073303Juvenile bud 10.077
CRR073304Juvenile bud 20.509
CRR073305Juvenile bud 30.199
CRR073306Third green 13.625
CRR073307Third green 23.048
CRR073308Third green 33.583
CRR073309Second white 16.133
CRR073310Second white 26.411
CRR073311Second white 39.127
CRR073312Silver flowering 19.932
CRR073313Silver flowering 210.620
CRR073314Silver flowering 311.855
CRR073315Gold flowering 10.305
CRR073316Gold flowering 20.291
CRR073317Gold flowering 30.314
CRR073318Tawny withering 13.871
CRR073319Tawny withering 21.519
CRR073320Tawny withering 34.369