Detail information of GWHGAAZE008702


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002273629.10PREDICTED: abscisic-aldehyde oxidase-like [Vitis vinifera]
Swissprottr|Q7G191|ALDO4_ARATH0Benzaldehyde dehydrogenase (NAD(+))
trEMBLtr|F6HAB3|F6HAB3_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CCB49192.1}
TAIR10AT1G04580.10aldehyde oxidase 4

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene8838400288396989-
GWHAAZE00000002mRNA8838400288396989-
GWHAAZE00000002exon8839683088396989-
GWHAAZE00000002exon8839369488395322-
GWHAAZE00000002exon8839217088392429-
GWHAAZE00000002exon8839186488392073-
GWHAAZE00000002exon8839113088391348-
GWHAAZE00000002exon8838910088390065-
GWHAAZE00000002exon8838852888388623-
GWHAAZE00000002exon8838566588385763-
GWHAAZE00000002exon8838484588385034-
GWHAAZE00000002exon8838400288384237-
GWHAAZE00000002CDS8839683088396989-
GWHAAZE00000002CDS8839369488395322-
GWHAAZE00000002CDS8839217088392429-
GWHAAZE00000002CDS8839186488392073-
GWHAAZE00000002CDS8839113088391348-
GWHAAZE00000002CDS8838910088390065-
GWHAAZE00000002CDS8838852888388623-
GWHAAZE00000002CDS8838566588385763-
GWHAAZE00000002CDS8838484588385034-
GWHAAZE00000002CDS8838400288384237-
Transcript Sequence

Network for GWHGAAZE008702

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00111.28Fer219845.90E-05
PF01799.21Fer2_2951801.20E-20
PF00941.22FAD_binding_52404208.10E-34
PF03450.18CO_deh_flav_C4395421.20E-20
PF01315.23Ald_Xan_dh_C5967041.00E-28
PF02738.19Ald_Xan_dh_C272612558.00E-159
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K09842AAO3 Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Carotenoid biosynthesismap00906

Gene Ontology

GO term OntologyName
GO:0055114biological_processoxidation-reduction process
GO:0071949molecular_functionFAD binding
GO:0016491molecular_functionoxidoreductase activity
GO:0009055molecular_functionelectron transfer activity
GO:0051536molecular_functioniron-sulfur cluster binding
GO:0050660molecular_functionflavin adenine dinucleotide binding
GO:0005506molecular_functioniron ion binding
GO:0046872molecular_functionmetal ion binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.136
SRR3591706second leaf0.739
SRR3591707mature leaf0.626
SRR3591708Shoot apex0.530
SRR3591709Stem0.085
SRR3591710White floral bud2.314
SRR3591711White flower2.693
SRR3591712Green floral bud0.650
SRR3591713Yellow flower5.554
SRP173429 SRR8316895Juvenile bud stage 0.177
SRR8316896Juvenile bud stage 0.341
SRR8316897Juvenile bud stage 0.072
SRR8316894Third green stage 0.114
SRR8316900Third green stage 0.137
SRR8316901Third green stage 0.164
SRR8316898Complete white stage 0.399
SRR8316899Complete white stage 0.194
SRR8316903Complete white stage 0.607
SRR8316902Silver flowering stage0.426
SRR8316904Silver flowering stage0.763
SRR8316905Silver flowering stage0.308
SRR8316906Gold flowering stage 0.971
SRR8316907Gold flowering stage 1.298
SRR8316908Gold flowering stage 0.149
SRP132670SRR6706286Control0.406
SRR6706287Light intensity 50%0.387
SRR6706288Light intensity 20%0.393
CNP0000432CNS0095592Slightly white alabastrum(diploid) 10.091
CNS0095593Slightly white alabastrum(diploid) 20.028
CNS0095594Slightly white alabastrum(diploid) 30.139
CNS0095595Whole white alabastrum(diploid) 20.064
CNS0095596Whole white alabastrum(diploid) 30.047
CNS0095597Whole white alabastrum(diploid) 40.066
CNS0095598Silvery flower (diploied) 10.543
CNS0095599Silvery flower (diploied) 20.406
CNS0095600Silvery flower (diploied) 32.652
CNS0095601Golden flower (diploid) 10.339
CNS0095602Golden flower (diploid) 22.259
CNS0095603Golden flower (diploid) 32.669
CNS0095604Slightly white alabastrum(tetraploid) 12.657
CNS0095605Slightly white alabastrum(tetraploid) 21.692
CNS0095606Slightly white alabastrum(tetraploid) 36.043
CNS0095607Whole white alabastrum(tetraploid) 11.586
CNS0095608Whole white alabastrum(tetraploid) 21.889
CNS0095609Whole white alabastrum(tetraploid) 33.334
CNS0095610Silvery flower (tetraploid) 15.483
CNS0095611Silvery flower (tetraploid) 22.665
CNS0095612Silvery flower (tetraploid) 32.206
CNS0095613Golden flower (tetraploid) 11.562
CNS0095614Golden flower (tetraploid) 22.896
CNS0095615Golden flower (tetraploid) 31.916
CRA001975CRR073297Stem 10.165
CRR073298Stem 20.136
CRR073299Stem 30.121
CRR073300Leaf 10.173
CRR073301Leaf 20.030
CRR073302Leaf 30.089
CRR073303Juvenile bud 10.038
CRR073304Juvenile bud 20.333
CRR073305Juvenile bud 30.083
CRR073306Third green 10.220
CRR073307Third green 20.230
CRR073308Third green 30.151
CRR073309Second white 10.278
CRR073310Second white 20.446
CRR073311Second white 30.667
CRR073312Silver flowering 10.609
CRR073313Silver flowering 20.242
CRR073314Silver flowering 30.676
CRR073315Gold flowering 10.023
CRR073316Gold flowering 20.116
CRR073317Gold flowering 30.182
CRR073318Tawny withering 11.156
CRR073319Tawny withering 20.347
CRR073320Tawny withering 30.832