Detail information of GWHGAAZE008640


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002273629.10PREDICTED: abscisic-aldehyde oxidase-like [Vitis vinifera]
Swissprottr|Q7G193|ALDO1_ARATH0Indole-3-acetaldehyde oxidase
trEMBLtr|V4SJP6|V4SJP6_9ROSI0Uncharacterized protein {ECO:0000313|EMBL:ESR37261.1}
TAIR10AT5G20960.20aldehyde oxidase 1

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene8593487285952315-
GWHAAZE00000002mRNA8593487285952315-
GWHAAZE00000002exon8595215085952315-
GWHAAZE00000002exon8594911685950744-
GWHAAZE00000002exon8594759185947850-
GWHAAZE00000002exon8594728585947494-
GWHAAZE00000002exon8594650385946721-
GWHAAZE00000002exon8594438885945353-
GWHAAZE00000002exon8594320785943302-
GWHAAZE00000002exon8593786385938093-
GWHAAZE00000002exon8593655185936649-
GWHAAZE00000002exon8593571885935907-
GWHAAZE00000002exon8593487285935107-
GWHAAZE00000002CDS8595215085952315-
GWHAAZE00000002CDS8594911685950744-
GWHAAZE00000002CDS8594759185947850-
GWHAAZE00000002CDS8594728585947494-
GWHAAZE00000002CDS8594650385946721-
GWHAAZE00000002CDS8594438885945353-
GWHAAZE00000002CDS8594320785943302-
GWHAAZE00000002CDS8593786385938093-
GWHAAZE00000002CDS8593655185936649-
GWHAAZE00000002CDS8593571885935907-
GWHAAZE00000002CDS8593487285935107-
Transcript Sequence

Network for GWHGAAZE008640

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0224GO:0071949 FAD binding GOslim:molecular_function
GO:0050660 flavin adenine dinucleotide binding GOslim:molecular_function
Protein Kinases RLK-Pelle_DLSV family Protein Kinases RLK-Pelle_DLSV


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00111.28Fer219861.50E-08
PF01799.21Fer2_2971829.80E-21
PF00941.22FAD_binding_52424229.20E-34
PF03450.18CO_deh_flav_C4415441.40E-19
PF01315.23Ald_Xan_dh_C5987067.10E-28
PF02738.19Ald_Xan_dh_C272811831.70E-122
PF02738.19Ald_Xan_dh_C2125813346.10E-27
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K09842AAO3 Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Carotenoid biosynthesismap00906

Gene Ontology

GO term OntologyName
GO:0055114biological_processoxidation-reduction process
GO:0009055molecular_functionelectron transfer activity
GO:0051536molecular_functioniron-sulfur cluster binding
GO:0050660molecular_functionflavin adenine dinucleotide binding
GO:0016491molecular_functionoxidoreductase activity
GO:0046872molecular_functionmetal ion binding
GO:0051537molecular_function2 iron, 2 sulfur cluster binding
GO:0005506molecular_functioniron ion binding
GO:0071949molecular_functionFAD binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.013
SRR3591706second leaf0.721
SRR3591707mature leaf0.323
SRR3591708Shoot apex0.489
SRR3591709Stem0.009
SRR3591710White floral bud0.392
SRR3591711White flower0.453
SRR3591712Green floral bud0.224
SRR3591713Yellow flower0.517
SRP173429 SRR8316895Juvenile bud stage 0.774
SRR8316896Juvenile bud stage 0.448
SRR8316897Juvenile bud stage 0.296
SRR8316894Third green stage 0.133
SRR8316900Third green stage 0.311
SRR8316901Third green stage 0.417
SRR8316898Complete white stage 1.149
SRR8316899Complete white stage 0.551
SRR8316903Complete white stage 1.941
SRR8316902Silver flowering stage0.468
SRR8316904Silver flowering stage0.698
SRR8316905Silver flowering stage0.297
SRR8316906Gold flowering stage 0.920
SRR8316907Gold flowering stage 1.259
SRR8316908Gold flowering stage 0.805
SRP132670SRR6706286Control0.841
SRR6706287Light intensity 50%0.923
SRR6706288Light intensity 20%0.638
CNP0000432CNS0095592Slightly white alabastrum(diploid) 10.494
CNS0095593Slightly white alabastrum(diploid) 20.330
CNS0095594Slightly white alabastrum(diploid) 30.541
CNS0095595Whole white alabastrum(diploid) 20.087
CNS0095596Whole white alabastrum(diploid) 30.025
CNS0095597Whole white alabastrum(diploid) 40.169
CNS0095598Silvery flower (diploied) 10.798
CNS0095599Silvery flower (diploied) 20.999
CNS0095600Silvery flower (diploied) 33.751
CNS0095601Golden flower (diploid) 11.155
CNS0095602Golden flower (diploid) 28.978
CNS0095603Golden flower (diploid) 39.005
CNS0095604Slightly white alabastrum(tetraploid) 10.045
CNS0095605Slightly white alabastrum(tetraploid) 20.012
CNS0095606Slightly white alabastrum(tetraploid) 30.061
CNS0095607Whole white alabastrum(tetraploid) 10.053
CNS0095608Whole white alabastrum(tetraploid) 20.032
CNS0095609Whole white alabastrum(tetraploid) 30.052
CNS0095610Silvery flower (tetraploid) 10.127
CNS0095611Silvery flower (tetraploid) 20.037
CNS0095612Silvery flower (tetraploid) 30.084
CNS0095613Golden flower (tetraploid) 10.142
CNS0095614Golden flower (tetraploid) 20.050
CNS0095615Golden flower (tetraploid) 30.120
CRA001975CRR073297Stem 10.935
CRR073298Stem 21.165
CRR073299Stem 31.671
CRR073300Leaf 10.620
CRR073301Leaf 20.245
CRR073302Leaf 30.243
CRR073303Juvenile bud 10.411
CRR073304Juvenile bud 20.505
CRR073305Juvenile bud 30.491
CRR073306Third green 10.109
CRR073307Third green 20.189
CRR073308Third green 30.066
CRR073309Second white 10.477
CRR073310Second white 20.733
CRR073311Second white 31.286
CRR073312Silver flowering 11.503
CRR073313Silver flowering 20.934
CRR073314Silver flowering 32.573
CRR073315Gold flowering 10.002
CRR073316Gold flowering 20.000
CRR073317Gold flowering 30.039
CRR073318Tawny withering 10.013
CRR073319Tawny withering 20.016
CRR073320Tawny withering 30.020