Detail information of GWHGAAZE008639


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrADR31354.10ABA aldehyde oxidase [Solanum lycopersicum]
Swissprottr|Q7G191|ALDO4_ARATH0Benzaldehyde dehydrogenase (NAD(+))
trEMBLtr|E5L4Q7|E5L4Q7_SOLLC0ABA aldehyde oxidase {ECO:0000313|EMBL:ADR31354.1}
TAIR10AT1G04580.10aldehyde oxidase 4

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene8587068785881695-
GWHAAZE00000002mRNA8587068785881695-
GWHAAZE00000002exon8587068785871009-
GWHAAZE00000002exon8587176285871951-
GWHAAZE00000002exon8587307885873191-
GWHAAZE00000002exon8587337185873466-
GWHAAZE00000002exon8587436885874532-
GWHAAZE00000002exon8587462585875332-
GWHAAZE00000002exon8587662985876847-
GWHAAZE00000002exon8587741485877623-
GWHAAZE00000002exon8587771985877978-
GWHAAZE00000002exon8587906985879125-
GWHAAZE00000002exon8587927585880678-
GWHAAZE00000002exon8588115285881173-
GWHAAZE00000002exon8588132085881383-
GWHAAZE00000002exon8588149385881695-
GWHAAZE00000002CDS8588149385881695-
GWHAAZE00000002CDS8588132085881383-
GWHAAZE00000002CDS8588115285881173-
GWHAAZE00000002CDS8587927585880678-
GWHAAZE00000002CDS8587906985879125-
GWHAAZE00000002CDS8587771985877978-
GWHAAZE00000002CDS8587741485877623-
GWHAAZE00000002CDS8587662985876847-
GWHAAZE00000002CDS8587462585875332-
GWHAAZE00000002CDS8587436885874532-
GWHAAZE00000002CDS8587337185873466-
GWHAAZE00000002CDS8587307885873191-
GWHAAZE00000002CDS8587176285871951-
GWHAAZE00000002CDS8587068785871009-
Transcript Sequence

Network for GWHGAAZE008639

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01799.21Fer2_21382231.20E-20
PF00941.22FAD_binding_52834631.50E-35
PF03450.18CO_deh_flav_C4825655.10E-14
PF01315.23Ald_Xan_dh_C5836919.00E-28
PF02738.19Ald_Xan_dh_C271310511.10E-102
PF02738.19Ald_Xan_dh_C2105412162.80E-41
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K09842AAO3 Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Carotenoid biosynthesismap00906

Gene Ontology

GO term OntologyName
GO:0055114biological_processoxidation-reduction process
GO:0016491molecular_functionoxidoreductase activity
GO:0046872molecular_functionmetal ion binding
GO:0009055molecular_functionelectron transfer activity
GO:0051536molecular_functioniron-sulfur cluster binding
GO:0050660molecular_functionflavin adenine dinucleotide binding
GO:0005506molecular_functioniron ion binding
GO:0071949molecular_functionFAD binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.694
SRR3591706second leaf3.000
SRR3591707mature leaf2.077
SRR3591708Shoot apex2.289
SRR3591709Stem0.170
SRR3591710White floral bud0.109
SRR3591711White flower0.267
SRR3591712Green floral bud0.088
SRR3591713Yellow flower0.869
SRP173429 SRR8316895Juvenile bud stage 1.474
SRR8316896Juvenile bud stage 1.098
SRR8316897Juvenile bud stage 0.593
SRR8316894Third green stage 0.634
SRR8316900Third green stage 0.726
SRR8316901Third green stage 1.042
SRR8316898Complete white stage 0.363
SRR8316899Complete white stage 0.573
SRR8316903Complete white stage 0.988
SRR8316902Silver flowering stage0.189
SRR8316904Silver flowering stage0.226
SRR8316905Silver flowering stage0.179
SRR8316906Gold flowering stage 0.404
SRR8316907Gold flowering stage 0.558
SRR8316908Gold flowering stage 0.524
SRP132670SRR6706286Control0.651
SRR6706287Light intensity 50%0.732
SRR6706288Light intensity 20%0.730
CNP0000432CNS0095592Slightly white alabastrum(diploid) 10.553
CNS0095593Slightly white alabastrum(diploid) 20.288
CNS0095594Slightly white alabastrum(diploid) 30.902
CNS0095595Whole white alabastrum(diploid) 20.451
CNS0095596Whole white alabastrum(diploid) 30.393
CNS0095597Whole white alabastrum(diploid) 40.869
CNS0095598Silvery flower (diploied) 14.214
CNS0095599Silvery flower (diploied) 23.305
CNS0095600Silvery flower (diploied) 30.725
CNS0095601Golden flower (diploid) 12.480
CNS0095602Golden flower (diploid) 21.476
CNS0095603Golden flower (diploid) 31.563
CNS0095604Slightly white alabastrum(tetraploid) 10.004
CNS0095605Slightly white alabastrum(tetraploid) 20.004
CNS0095606Slightly white alabastrum(tetraploid) 30.016
CNS0095607Whole white alabastrum(tetraploid) 10.016
CNS0095608Whole white alabastrum(tetraploid) 20.003
CNS0095609Whole white alabastrum(tetraploid) 30.013
CNS0095610Silvery flower (tetraploid) 10.000
CNS0095611Silvery flower (tetraploid) 20.000
CNS0095612Silvery flower (tetraploid) 30.000
CNS0095613Golden flower (tetraploid) 10.016
CNS0095614Golden flower (tetraploid) 20.008
CNS0095615Golden flower (tetraploid) 30.000
CRA001975CRR073297Stem 12.201
CRR073298Stem 21.833
CRR073299Stem 30.627
CRR073300Leaf 10.452
CRR073301Leaf 20.693
CRR073302Leaf 30.215
CRR073303Juvenile bud 10.083
CRR073304Juvenile bud 20.183
CRR073305Juvenile bud 30.309
CRR073306Third green 10.022
CRR073307Third green 20.025
CRR073308Third green 30.049
CRR073309Second white 10.030
CRR073310Second white 20.001
CRR073311Second white 30.001
CRR073312Silver flowering 10.024
CRR073313Silver flowering 20.176
CRR073314Silver flowering 30.038
CRR073315Gold flowering 10.181
CRR073316Gold flowering 20.319
CRR073317Gold flowering 30.109
CRR073318Tawny withering 10.025
CRR073319Tawny withering 20.122
CRR073320Tawny withering 30.000