Detail information of GWHGAAZE008243


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_011080226.10PREDICTED: omega-6 fatty acid desaturase, endoplasmic reticulum isozyme 2-like isoform X1 [Sesamum indicum]
Swissprottr|P48631|FD6E2_SOYBN0Omega-6 fatty acid desaturase, endoplasmic reticulum isozyme 2
trEMBLtr|D2CM01|D2CM01_DAVIN0Delta-12 fatty acid desaturase {ECO:0000313|EMBL:ABZ05022.1}
TAIR10AT3G12120.24E-172fatty acid desaturase 2

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene6720906467210191-
GWHAAZE00000002mRNA6720906467210191-
GWHAAZE00000002exon6720906467210191-
GWHAAZE00000002CDS6720906467210191-
Transcript Sequence

Network for GWHGAAZE008243

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF11960.9DUF347414554.30E-08
PF00487.25FA_desaturase773389.10E-32
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K10256FAD2 Metabolic pathways map01100
Fatty acid metabolismmap01212
Biosynthesis of unsaturated fatty acidsmap01040

Gene Ontology

GO term OntologyName
GO:0006629biological_processlipid metabolic process
GO:0055114biological_processoxidation-reduction process
GO:0016717molecular_functionoxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf20.804
SRR3591706second leaf146.215
SRR3591707mature leaf3.458
SRR3591708Shoot apex75.950
SRR3591709Stem7.670
SRR3591710White floral bud709.033
SRR3591711White flower648.289
SRR3591712Green floral bud260.216
SRR3591713Yellow flower620.945
SRP173429 SRR8316895Juvenile bud stage 130.477
SRR8316896Juvenile bud stage 169.003
SRR8316897Juvenile bud stage 72.836
SRR8316894Third green stage 41.149
SRR8316900Third green stage 130.618
SRR8316901Third green stage 134.423
SRR8316898Complete white stage 232.958
SRR8316899Complete white stage 40.336
SRR8316903Complete white stage 445.470
SRR8316902Silver flowering stage423.430
SRR8316904Silver flowering stage610.702
SRR8316905Silver flowering stage360.908
SRR8316906Gold flowering stage 1106.464
SRR8316907Gold flowering stage 1230.550
SRR8316908Gold flowering stage 1309.115
SRP132670SRR6706286Control241.612
SRR6706287Light intensity 50%261.127
SRR6706288Light intensity 20%206.391
CNP0000432CNS0095592Slightly white alabastrum(diploid) 1147.619
CNS0095593Slightly white alabastrum(diploid) 2117.488
CNS0095594Slightly white alabastrum(diploid) 3223.441
CNS0095595Whole white alabastrum(diploid) 2160.189
CNS0095596Whole white alabastrum(diploid) 3191.393
CNS0095597Whole white alabastrum(diploid) 4222.545
CNS0095598Silvery flower (diploied) 1160.787
CNS0095599Silvery flower (diploied) 2221.668
CNS0095600Silvery flower (diploied) 31112.688
CNS0095601Golden flower (diploid) 1233.643
CNS0095602Golden flower (diploid) 21120.570
CNS0095603Golden flower (diploid) 31051.713
CNS0095604Slightly white alabastrum(tetraploid) 1168.317
CNS0095605Slightly white alabastrum(tetraploid) 2183.755
CNS0095606Slightly white alabastrum(tetraploid) 397.986
CNS0095607Whole white alabastrum(tetraploid) 1277.633
CNS0095608Whole white alabastrum(tetraploid) 2294.939
CNS0095609Whole white alabastrum(tetraploid) 3324.370
CNS0095610Silvery flower (tetraploid) 1730.554
CNS0095611Silvery flower (tetraploid) 2924.451
CNS0095612Silvery flower (tetraploid) 32488.496
CNS0095613Golden flower (tetraploid) 11164.081
CNS0095614Golden flower (tetraploid) 21195.396
CNS0095615Golden flower (tetraploid) 32021.779
CRA001975CRR073297Stem 1384.727
CRR073298Stem 2381.917
CRR073299Stem 3509.952
CRR073300Leaf 1217.608
CRR073301Leaf 2193.079
CRR073302Leaf 3260.566
CRR073303Juvenile bud 1211.285
CRR073304Juvenile bud 2332.371
CRR073305Juvenile bud 3169.232
CRR073306Third green 12299.960
CRR073307Third green 21875.237
CRR073308Third green 31727.720
CRR073309Second white 14139.457
CRR073310Second white 22701.992
CRR073311Second white 33206.780
CRR073312Silver flowering 14158.279
CRR073313Silver flowering 25541.956
CRR073314Silver flowering 33949.686
CRR073315Gold flowering 116.057
CRR073316Gold flowering 25.448
CRR073317Gold flowering 319.052
CRR073318Tawny withering 117.779
CRR073319Tawny withering 222.890
CRR073320Tawny withering 315.964