Detail information of GWHGAAZE007982


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002274695.13.9233E-177PREDICTED: spermidine hydroxycinnamoyl transferase-like [Vitis vinifera]
Swissprottr|O64470|SHT_ARATH1E-145Spermidine hydroxycinnamoyl transferase
trEMBLtr|H9DUD7|H9DUD7_CAMSI2E-173Putative hydroxycinnamoyl-CoA:shikimate/quinate hydroxycinnamoyltransferase {ECO:0000313|EMBL:AFD64619.1}
TAIR10AT2G19070.19E-120spermidine hydroxycinnamoyl transferase

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene5851594558517249+
GWHAAZE00000002mRNA5851594558517249+
GWHAAZE00000002exon5851594558517249+
GWHAAZE00000002CDS5851594558517249+
Transcript Sequence

Network for GWHGAAZE007982

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02458.16Transferase24328.60E-103
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K13065E2.3.1.133, HCT Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Phenylpropanoid biosynthesismap00940
Stilbenoid, diarylheptanoid and gingerol biosynthesismap00945
Flavonoid biosynthesismap00941

Gene Ontology

GO term OntologyName
GO:0016747molecular_functiontransferase activity, transferring acyl groups other than amino-acyl groups

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf1.386
SRR3591706second leaf0.000
SRR3591707mature leaf0.008
SRR3591708Shoot apex0.000
SRR3591709Stem5.955
SRR3591710White floral bud1.631
SRR3591711White flower9.451
SRR3591712Green floral bud1.036
SRR3591713Yellow flower0.703
SRP173429 SRR8316895Juvenile bud stage 0.114
SRR8316896Juvenile bud stage 0.206
SRR8316897Juvenile bud stage 0.000
SRR8316894Third green stage 0.026
SRR8316900Third green stage 0.030
SRR8316901Third green stage 0.106
SRR8316898Complete white stage 0.366
SRR8316899Complete white stage 0.443
SRR8316903Complete white stage 0.639
SRR8316902Silver flowering stage0.237
SRR8316904Silver flowering stage1.011
SRR8316905Silver flowering stage0.233
SRR8316906Gold flowering stage 3.592
SRR8316907Gold flowering stage 2.577
SRR8316908Gold flowering stage 1.542
SRP132670SRR6706286Control0.097
SRR6706287Light intensity 50%0.111
SRR6706288Light intensity 20%0.010
CNP0000432CNS0095592Slightly white alabastrum(diploid) 10.101
CNS0095593Slightly white alabastrum(diploid) 20.039
CNS0095594Slightly white alabastrum(diploid) 30.154
CNS0095595Whole white alabastrum(diploid) 20.064
CNS0095596Whole white alabastrum(diploid) 30.033
CNS0095597Whole white alabastrum(diploid) 40.050
CNS0095598Silvery flower (diploied) 10.525
CNS0095599Silvery flower (diploied) 20.000
CNS0095600Silvery flower (diploied) 30.622
CNS0095601Golden flower (diploid) 10.016
CNS0095602Golden flower (diploid) 21.232
CNS0095603Golden flower (diploid) 31.333
CNS0095604Slightly white alabastrum(tetraploid) 11.008
CNS0095605Slightly white alabastrum(tetraploid) 20.851
CNS0095606Slightly white alabastrum(tetraploid) 32.813
CNS0095607Whole white alabastrum(tetraploid) 10.917
CNS0095608Whole white alabastrum(tetraploid) 20.837
CNS0095609Whole white alabastrum(tetraploid) 30.247
CNS0095610Silvery flower (tetraploid) 11.828
CNS0095611Silvery flower (tetraploid) 21.142
CNS0095612Silvery flower (tetraploid) 30.643
CNS0095613Golden flower (tetraploid) 10.603
CNS0095614Golden flower (tetraploid) 21.426
CNS0095615Golden flower (tetraploid) 30.761
CRA001975CRR073297Stem 10.000
CRR073298Stem 20.061
CRR073299Stem 30.021
CRR073300Leaf 10.036
CRR073301Leaf 20.031
CRR073302Leaf 30.000
CRR073303Juvenile bud 10.058
CRR073304Juvenile bud 20.236
CRR073305Juvenile bud 30.032
CRR073306Third green 10.502
CRR073307Third green 21.546
CRR073308Third green 31.749
CRR073309Second white 13.836
CRR073310Second white 21.894
CRR073311Second white 31.189
CRR073312Silver flowering 11.634
CRR073313Silver flowering 21.836
CRR073314Silver flowering 30.938
CRR073315Gold flowering 10.000
CRR073316Gold flowering 20.000
CRR073317Gold flowering 30.027
CRR073318Tawny withering 120.851
CRR073319Tawny withering 216.306
CRR073320Tawny withering 34.533