Detail information of GWHGAAZE007887


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_004288224.10PREDICTED: inositol-3-phosphate synthase-like [Fragaria vesca subsp. vesca]
Swissprottr|Q9FYV1|INO1_SESIN0Inositol-3-phosphate synthase
trEMBLtr|A0A068TYS6|A0A068TYS6_COFCA0Coffea canephora DH200=94 genomic scaffold, scaffold_7 {ECO:0000313|EMBL:CDP01421.1}
TAIR10AT2G22240.10myo-inositol-1-phosphate synthase 2

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene5535487955359893-
GWHAAZE00000002mRNA5535487955359893-
GWHAAZE00000002exon5535487955354998-
GWHAAZE00000002exon5535612555356187-
GWHAAZE00000002exon5535643955356627-
GWHAAZE00000002exon5535700455357180-
GWHAAZE00000002exon5535745255357567-
GWHAAZE00000002exon5535766655357892-
GWHAAZE00000002exon5535811455358361-
GWHAAZE00000002exon5535866255358797-
GWHAAZE00000002exon5535949455359562-
GWHAAZE00000002exon5535973955359893-
GWHAAZE00000002CDS5535973955359893-
GWHAAZE00000002CDS5535949455359562-
GWHAAZE00000002CDS5535866255358797-
GWHAAZE00000002CDS5535811455358361-
GWHAAZE00000002CDS5535766655357892-
GWHAAZE00000002CDS5535745255357567-
GWHAAZE00000002CDS5535700455357180-
GWHAAZE00000002CDS5535643955356627-
GWHAAZE00000002CDS5535612555356187-
GWHAAZE00000002CDS5535487955354998-
Transcript Sequence

Network for GWHGAAZE007887

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF07994.13NAD_binding_5514838.40E-141
PF01658.18Inos-1-P_synth2994122.10E-43
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K01858INO1, ISYNA1 Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Inositol phosphate metabolismmap00562
Streptomycin biosynthesismap00521

Gene Ontology

GO term OntologyName
GO:0006021biological_processinositol biosynthetic process
GO:0008654biological_processphospholipid biosynthetic process
GO:0004512molecular_functioninositol-3-phosphate synthase activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf201.425
SRR3591706second leaf693.239
SRR3591707mature leaf308.297
SRR3591708Shoot apex257.034
SRR3591709Stem72.840
SRR3591710White floral bud244.134
SRR3591711White flower193.094
SRR3591712Green floral bud380.464
SRR3591713Yellow flower174.813
SRP173429 SRR8316895Juvenile bud stage 579.032
SRR8316896Juvenile bud stage 542.222
SRR8316897Juvenile bud stage 232.328
SRR8316894Third green stage 246.896
SRR8316900Third green stage 694.345
SRR8316901Third green stage 502.991
SRR8316898Complete white stage 73.868
SRR8316899Complete white stage 580.598
SRR8316903Complete white stage 114.700
SRR8316902Silver flowering stage6.254
SRR8316904Silver flowering stage12.624
SRR8316905Silver flowering stage6.392
SRR8316906Gold flowering stage 11.314
SRR8316907Gold flowering stage 8.989
SRR8316908Gold flowering stage 31.045
SRP132670SRR6706286Control464.358
SRR6706287Light intensity 50%513.452
SRR6706288Light intensity 20%594.465
CNP0000432CNS0095592Slightly white alabastrum(diploid) 1308.821
CNS0095593Slightly white alabastrum(diploid) 2253.462
CNS0095594Slightly white alabastrum(diploid) 3263.809
CNS0095595Whole white alabastrum(diploid) 2294.047
CNS0095596Whole white alabastrum(diploid) 3209.766
CNS0095597Whole white alabastrum(diploid) 4218.072
CNS0095598Silvery flower (diploied) 1217.873
CNS0095599Silvery flower (diploied) 2199.359
CNS0095600Silvery flower (diploied) 378.881
CNS0095601Golden flower (diploid) 1153.954
CNS0095602Golden flower (diploid) 2103.503
CNS0095603Golden flower (diploid) 3103.048
CNS0095604Slightly white alabastrum(tetraploid) 1340.678
CNS0095605Slightly white alabastrum(tetraploid) 2273.381
CNS0095606Slightly white alabastrum(tetraploid) 3634.202
CNS0095607Whole white alabastrum(tetraploid) 1190.825
CNS0095608Whole white alabastrum(tetraploid) 2105.729
CNS0095609Whole white alabastrum(tetraploid) 3348.464
CNS0095610Silvery flower (tetraploid) 16.642
CNS0095611Silvery flower (tetraploid) 248.348
CNS0095612Silvery flower (tetraploid) 319.643
CNS0095613Golden flower (tetraploid) 113.079
CNS0095614Golden flower (tetraploid) 223.524
CNS0095615Golden flower (tetraploid) 34.217
CRA001975CRR073297Stem 1947.197
CRR073298Stem 2748.919
CRR073299Stem 31503.990
CRR073300Leaf 1602.806
CRR073301Leaf 2607.244
CRR073302Leaf 31003.486
CRR073303Juvenile bud 1918.007
CRR073304Juvenile bud 2396.539
CRR073305Juvenile bud 3529.344
CRR073306Third green 129.916
CRR073307Third green 234.196
CRR073308Third green 337.931
CRR073309Second white 114.344
CRR073310Second white 215.221
CRR073311Second white 35.333
CRR073312Silver flowering 18.292
CRR073313Silver flowering 223.839
CRR073314Silver flowering 314.996
CRR073315Gold flowering 1254.334
CRR073316Gold flowering 2241.256
CRR073317Gold flowering 3235.036
CRR073318Tawny withering 155.555
CRR073319Tawny withering 272.027
CRR073320Tawny withering 317.046