Detail information of GWHGAAZE007826


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrCDP01541.10unnamed protein product [Coffea canephora]
Swissprottr|Q8VYN6|PFKA5_ARATH0ATP-dependent 6-phosphofructokinase 5, chloroplastic {ECO:0000255|HAMAP-Rule:MF_03186} (Precursor)
trEMBLtr|A0A068TZ47|A0A068TZ47_COFCA0Coffea canephora DH200=94 genomic scaffold, scaffold_7 {ECO:0000313|EMBL:CDP01541.1}
TAIR10AT2G22480.10phosphofructokinase 5

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene5369034353700628-
GWHAAZE00000002mRNA5369034353700628-
GWHAAZE00000002exon5369034353690510-
GWHAAZE00000002exon5369133453691462-
GWHAAZE00000002exon5369171153691791-
GWHAAZE00000002exon5369279653692900-
GWHAAZE00000002exon5369297653693092-
GWHAAZE00000002exon5369344953693589-
GWHAAZE00000002exon5369499853695072-
GWHAAZE00000002exon5369520353695304-
GWHAAZE00000002exon5369541853695510-
GWHAAZE00000002exon5369599053696038-
GWHAAZE00000002exon5369643153696504-
GWHAAZE00000002exon5369867253698762-
GWHAAZE00000002exon5370014853700628-
GWHAAZE00000002five_prime_UTR5370046853700628-
GWHAAZE00000002CDS5370014853700467-
GWHAAZE00000002CDS5369867253698762-
GWHAAZE00000002CDS5369643153696504-
GWHAAZE00000002CDS5369599053696038-
GWHAAZE00000002CDS5369541853695510-
GWHAAZE00000002CDS5369520353695304-
GWHAAZE00000002CDS5369499853695072-
GWHAAZE00000002CDS5369344953693589-
GWHAAZE00000002CDS5369297653693092-
GWHAAZE00000002CDS5369279653692900-
GWHAAZE00000002CDS5369171153691791-
GWHAAZE00000002CDS5369133453691462-
GWHAAZE00000002CDS5369034353690510-
Transcript Sequence

Network for GWHGAAZE007826

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00365.21PFK1854611.50E-54
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K00850pfkA, PFK Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Microbial metabolism in diverse environmentsmap01120
Carbon metabolismmap01200
Biosynthesis of amino acidsmap01230
Glycolysis / Gluconeogenesismap00010
Pentose phosphate pathwaymap00030
Fructose and mannose metabolismmap00051
Galactose metabolismmap00052
Methane metabolismmap00680
RNA degradationmap03018
HIF-1 signaling pathwaymap04066
AMPK signaling pathwaymap04152
Glucagon signaling pathwaymap04922
Thyroid hormone signaling pathwaymap04919

Gene Ontology

GO term OntologyName
GO:0006002biological_processfructose 6-phosphate metabolic process
GO:0006096biological_processglycolytic process
GO:0003872molecular_function6-phosphofructokinase activity
GO:0005524molecular_functionATP binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf10.489
SRR3591706second leaf15.801
SRR3591707mature leaf7.878
SRR3591708Shoot apex11.734
SRR3591709Stem4.797
SRR3591710White floral bud8.399
SRR3591711White flower5.564
SRR3591712Green floral bud18.017
SRR3591713Yellow flower3.220
SRP173429 SRR8316895Juvenile bud stage 12.866
SRR8316896Juvenile bud stage 18.710
SRR8316897Juvenile bud stage 11.067
SRR8316894Third green stage 8.914
SRR8316900Third green stage 28.320
SRR8316901Third green stage 26.344
SRR8316898Complete white stage 11.113
SRR8316899Complete white stage 29.807
SRR8316903Complete white stage 14.008
SRR8316902Silver flowering stage5.196
SRR8316904Silver flowering stage6.472
SRR8316905Silver flowering stage3.225
SRR8316906Gold flowering stage 13.657
SRR8316907Gold flowering stage 13.104
SRR8316908Gold flowering stage 20.098
SRP132670SRR6706286Control30.767
SRR6706287Light intensity 50%35.478
SRR6706288Light intensity 20%39.969
CNP0000432CNS0095592Slightly white alabastrum(diploid) 115.493
CNS0095593Slightly white alabastrum(diploid) 219.154
CNS0095594Slightly white alabastrum(diploid) 317.281
CNS0095595Whole white alabastrum(diploid) 220.010
CNS0095596Whole white alabastrum(diploid) 318.216
CNS0095597Whole white alabastrum(diploid) 419.577
CNS0095598Silvery flower (diploied) 17.951
CNS0095599Silvery flower (diploied) 29.153
CNS0095600Silvery flower (diploied) 312.665
CNS0095601Golden flower (diploid) 18.183
CNS0095602Golden flower (diploid) 210.255
CNS0095603Golden flower (diploid) 39.635
CNS0095604Slightly white alabastrum(tetraploid) 120.197
CNS0095605Slightly white alabastrum(tetraploid) 219.292
CNS0095606Slightly white alabastrum(tetraploid) 328.944
CNS0095607Whole white alabastrum(tetraploid) 112.973
CNS0095608Whole white alabastrum(tetraploid) 213.183
CNS0095609Whole white alabastrum(tetraploid) 326.822
CNS0095610Silvery flower (tetraploid) 19.542
CNS0095611Silvery flower (tetraploid) 210.118
CNS0095612Silvery flower (tetraploid) 312.110
CNS0095613Golden flower (tetraploid) 14.146
CNS0095614Golden flower (tetraploid) 28.934
CNS0095615Golden flower (tetraploid) 32.650
CRA001975CRR073297Stem 124.570
CRR073298Stem 224.583
CRR073299Stem 321.961
CRR073300Leaf 144.122
CRR073301Leaf 238.604
CRR073302Leaf 342.958
CRR073303Juvenile bud 151.228
CRR073304Juvenile bud 257.724
CRR073305Juvenile bud 342.048
CRR073306Third green 19.875
CRR073307Third green 28.010
CRR073308Third green 39.840
CRR073309Second white 121.323
CRR073310Second white 217.235
CRR073311Second white 315.415
CRR073312Silver flowering 112.703
CRR073313Silver flowering 214.921
CRR073314Silver flowering 311.643
CRR073315Gold flowering 18.207
CRR073316Gold flowering 210.166
CRR073317Gold flowering 36.677
CRR073318Tawny withering 112.186
CRR073319Tawny withering 214.022
CRR073320Tawny withering 313.133