Detail information of GWHGAAZE007824


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_010523319.13.2965E-157PREDICTED: 14-3-3-like protein GF14 kappa isoform X1 [Tarenaya hassleriana]
Swissprottr|P93206|14331_SOLLC1E-15714-3-3 protein 1
trEMBLtr|K4D5K8|K4D5K8_SOLLC3E-156Uncharacterized protein {ECO:0000313|EnsemblPlants:Solyc11g010470.1.1}
TAIR10AT5G10450.15E-110G-box regulating factor 6

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene5366208753668763+
GWHAAZE00000002mRNA5366208753668763+
GWHAAZE00000002exon5366208753662569+
GWHAAZE00000002exon5366566753665789+
GWHAAZE00000002exon5366810053668216+
GWHAAZE00000002exon5366874353668763+
GWHAAZE00000002CDS5366208753662569+
GWHAAZE00000002CDS5366566753665789+
GWHAAZE00000002CDS5366810053668216+
GWHAAZE00000002CDS5366874353668763+
Transcript Sequence

Network for GWHGAAZE007824

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00244.212014/3/3132373.40E-97
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K06630YWHAE MAPK signaling pathway - yeast map04011
Hippo signaling pathwaymap04390
Hippo signaling pathway - flymap04391
PI3K-Akt signaling pathwaymap04151
Cell cyclemap04110
Oocyte meiosismap04114
NOD-like receptor signaling pathwaymap04621
Neurotrophin signaling pathwaymap04722

Gene Ontology

GO term OntologyName
GO:0019904molecular_functionprotein domain specific binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf13.124
SRR3591706second leaf90.424
SRR3591707mature leaf104.408
SRR3591708Shoot apex14.876
SRR3591709Stem24.017
SRR3591710White floral bud136.836
SRR3591711White flower79.271
SRR3591712Green floral bud155.920
SRR3591713Yellow flower53.071
SRP173429 SRR8316895Juvenile bud stage 60.627
SRR8316896Juvenile bud stage 90.120
SRR8316897Juvenile bud stage 48.189
SRR8316894Third green stage 31.576
SRR8316900Third green stage 127.039
SRR8316901Third green stage 115.057
SRR8316898Complete white stage 74.807
SRR8316899Complete white stage 182.422
SRR8316903Complete white stage 96.569
SRR8316902Silver flowering stage55.577
SRR8316904Silver flowering stage52.690
SRR8316905Silver flowering stage29.592
SRR8316906Gold flowering stage 119.532
SRR8316907Gold flowering stage 110.376
SRR8316908Gold flowering stage 95.585
SRP132670SRR6706286Control134.200
SRR6706287Light intensity 50%146.680
SRR6706288Light intensity 20%158.203
CNP0000432CNS0095592Slightly white alabastrum(diploid) 164.243
CNS0095593Slightly white alabastrum(diploid) 259.122
CNS0095594Slightly white alabastrum(diploid) 361.678
CNS0095595Whole white alabastrum(diploid) 265.574
CNS0095596Whole white alabastrum(diploid) 355.082
CNS0095597Whole white alabastrum(diploid) 453.428
CNS0095598Silvery flower (diploied) 160.193
CNS0095599Silvery flower (diploied) 271.695
CNS0095600Silvery flower (diploied) 390.427
CNS0095601Golden flower (diploid) 158.913
CNS0095602Golden flower (diploid) 266.395
CNS0095603Golden flower (diploid) 364.848
CNS0095604Slightly white alabastrum(tetraploid) 190.026
CNS0095605Slightly white alabastrum(tetraploid) 292.227
CNS0095606Slightly white alabastrum(tetraploid) 3135.917
CNS0095607Whole white alabastrum(tetraploid) 164.606
CNS0095608Whole white alabastrum(tetraploid) 261.553
CNS0095609Whole white alabastrum(tetraploid) 3124.071
CNS0095610Silvery flower (tetraploid) 1119.945
CNS0095611Silvery flower (tetraploid) 2178.431
CNS0095612Silvery flower (tetraploid) 3159.931
CNS0095613Golden flower (tetraploid) 150.997
CNS0095614Golden flower (tetraploid) 275.723
CNS0095615Golden flower (tetraploid) 362.423
CRA001975CRR073297Stem 192.919
CRR073298Stem 285.420
CRR073299Stem 3144.370
CRR073300Leaf 1117.614
CRR073301Leaf 2130.021
CRR073302Leaf 3169.529
CRR073303Juvenile bud 1157.378
CRR073304Juvenile bud 2203.860
CRR073305Juvenile bud 3148.550
CRR073306Third green 1205.701
CRR073307Third green 2138.589
CRR073308Third green 3147.727
CRR073309Second white 1295.657
CRR073310Second white 2169.039
CRR073311Second white 382.978
CRR073312Silver flowering 160.302
CRR073313Silver flowering 291.300
CRR073314Silver flowering 348.135
CRR073315Gold flowering 1265.779
CRR073316Gold flowering 2295.724
CRR073317Gold flowering 3302.768
CRR073318Tawny withering 158.805
CRR073319Tawny withering 257.071
CRR073320Tawny withering 363.311