Gene detail

Detail information of GWHGAAZE007419

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	NP_001279994.1	2.0787E-111	uncharacterized protein LOC100263246 [Vitis vinifera]
Swissprot	tr\|Q9ZU65\|OFP7_ARATH	1E-53	Transcription repressor OFP7
trEMBL	tr\|A0A024CBV9\|A0A024CBV9_VITVI	8E-112	Ovate family protein {ECO:0000313\|EMBL:AHZ31610.1}
TAIR10	AT2G18500.1	1E-23	ovate family protein 7

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000002	gene	44952056	44954203	-
GWHAAZE00000002	mRNA	44952056	44954203	-
GWHAAZE00000002	exon	44952056	44952513	-
GWHAAZE00000002	exon	44952803	44953370	-
GWHAAZE00000002	exon	44954201	44954203	-
GWHAAZE00000002	CDS	44954201	44954203	-
GWHAAZE00000002	CDS	44952803	44953370	-
GWHAAZE00000002	CDS	44952056	44952513	-

Transcript Sequence
>GWHTAAZE007427 ATGACACAAGCCTTGACCCCCCCAAAATGGCGAAATTTCAAGCTTCGTATCTCTCGAGTCATCCCATCCTTCCAATCCTGCCGCTCCAAAGACCCCTCCACCCTTCCAAACAATCCTGTCCCTTCCTTCTTCAGACTTTCCCCAGTCAACCCCAAGCTCATACCCGTCGATTTCCCTATCACCCCACCCCCTTCAAAACAACCCCATCGATCCTCCTTTAAGCACCACGTGTCCTCCGCCTTCATATCCGTCGGCAGTCGCTTTAAATCAAAGCCTGCAGCTCCACGTTATGCCGATAGTGACGAACCCGCCGAATTAAACCAATTCCAGTGGCAAAAAGAGGATGAATGGCACATTATCGCTAAGGTCTACGAAGAAGAATCTCCCCGTAGGAAGATCTACAACTCCTCTGTCTCTGCCGGATCCGGCAATGATACCTTGCCGGTTCCGGTTAAGAAGAAAAGACGGAACAGAAAAAAGAGAAATGTAACGAGAAATCGTTTGAGTACCTCATCGGCCGATAGTGTGCTATTTAGCGATGAGAGAGACGGAGAAGAGACCGAAACCCTAGTGTCCTCTTCTAGAAGCTTCTCGACCGATTCGTCGACAGATTTCAATCCGCAGCTCGAGACGATCCGGGAGGCGCCCGTGAATCGCCGACAGAAGAAGAAGAAGACGAAGAGATCAGCAAGGCGCGCTGCCAAGGGGATGTGCCGGCCATCGGATTCGTCGGCGGAGTGCGAGATTCCAGCGAGGCTGTCAGTGTTTAAGAAGCTGATTCCGTGCGAGGTGGAGGGGAAAGTGAAGGAGAGCTTTGCGATAGTGAAGAAATCGGAGGATCCGTACGAGGATTTCAGGAGATCTATGATGGAGATGGTATTGGAGAAGGAGATGTTCGAGGAGAGAGATTTGGAGGAGTTGTTGAAGTGCTTTTTGTCGTTGAATTCGAGGGATCACCATGGGGTGATTGTTGAAGCTTTTTCTGAGATTTGGGAGGGTATTTTTGCTGCTAGAAGCGCTTCTGTCAAA

Network for GWHGAAZE007419

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF04844.14	Ovate	278	334	6.40E-26

Protein Sequence

Gene family

Gene family	subfamily
Transcription Factors Family	OFP

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	5.456
	SRR3591706	second leaf	0.715
	SRR3591707	mature leaf	0.000
	SRR3591708	Shoot apex	3.488
	SRR3591709	Stem	6.857
	SRR3591710	White floral bud	3.730
	SRR3591711	White flower	4.507
	SRR3591712	Green floral bud	0.897
	SRR3591713	Yellow flower	0.139
SRP173429	SRR8316895	Juvenile bud stage	2.078
	SRR8316896	Juvenile bud stage	0.418
	SRR8316897	Juvenile bud stage	0.529
	SRR8316894	Third green stage	0.435
	SRR8316900	Third green stage	0.254
	SRR8316901	Third green stage	0.255
	SRR8316898	Complete white stage	0.000
	SRR8316899	Complete white stage	1.597
	SRR8316903	Complete white stage	0.678
	SRR8316902	Silver flowering stage	0.044
	SRR8316904	Silver flowering stage	0.067
	SRR8316905	Silver flowering stage	0.033
	SRR8316906	Gold flowering stage	0.000
	SRR8316907	Gold flowering stage	0.000
	SRR8316908	Gold flowering stage	0.000
SRP132670	SRR6706286	Control	0.745
	SRR6706287	Light intensity 50%	0.974
	SRR6706288	Light intensity 20%	0.633
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	1.552
	CNS0095593	Slightly white alabastrum(diploid) 2	1.051
	CNS0095594	Slightly white alabastrum(diploid) 3	2.424
	CNS0095595	Whole white alabastrum(diploid) 2	1.750
	CNS0095596	Whole white alabastrum(diploid) 3	0.335
	CNS0095597	Whole white alabastrum(diploid) 4	1.992
	CNS0095598	Silvery flower (diploied) 1	5.809
	CNS0095599	Silvery flower (diploied) 2	3.658
	CNS0095600	Silvery flower (diploied) 3	0.292
	CNS0095601	Golden flower (diploid) 1	2.292
	CNS0095602	Golden flower (diploid) 2	1.677
	CNS0095603	Golden flower (diploid) 3	1.783
	CNS0095604	Slightly white alabastrum(tetraploid) 1	3.370
	CNS0095605	Slightly white alabastrum(tetraploid) 2	2.725
	CNS0095606	Slightly white alabastrum(tetraploid) 3	8.727
	CNS0095607	Whole white alabastrum(tetraploid) 1	5.928
	CNS0095608	Whole white alabastrum(tetraploid) 2	0.503
	CNS0095609	Whole white alabastrum(tetraploid) 3	0.324
	CNS0095610	Silvery flower (tetraploid) 1	0.000
	CNS0095611	Silvery flower (tetraploid) 2	3.674
	CNS0095612	Silvery flower (tetraploid) 3	1.203
	CNS0095613	Golden flower (tetraploid) 1	0.067
	CNS0095614	Golden flower (tetraploid) 2	0.000
	CNS0095615	Golden flower (tetraploid) 3	0.000
CRA001975	CRR073297	Stem 1	2.074
	CRR073298	Stem 2	1.086
	CRR073299	Stem 3	3.094
	CRR073300	Leaf 1	0.497
	CRR073301	Leaf 2	0.123
	CRR073302	Leaf 3	0.053
	CRR073303	Juvenile bud 1	0.038
	CRR073304	Juvenile bud 2	0.203
	CRR073305	Juvenile bud 3	0.000
	CRR073306	Third green 1	0.000
	CRR073307	Third green 2	0.167
	CRR073308	Third green 3	0.417
	CRR073309	Second white 1	0.000
	CRR073310	Second white 2	0.000
	CRR073311	Second white 3	0.003
	CRR073312	Silver flowering 1	0.000
	CRR073313	Silver flowering 2	0.322
	CRR073314	Silver flowering 3	0.000
	CRR073315	Gold flowering 1	0.000
	CRR073316	Gold flowering 2	0.112
	CRR073317	Gold flowering 3	0.164
	CRR073318	Tawny withering 1	22.386
	CRR073319	Tawny withering 2	12.999
	CRR073320	Tawny withering 3	29.737