Detail information of GWHGAAZE007408


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002273758.10PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit isoform X4 [Vitis vinifera]
Swissprottr|Q944K2|OST48_ARATH0Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit (Precursor)
trEMBLtr|D7SPJ2|D7SPJ2_VITVI0Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit {ECO:0000256|RuleBase:RU361142}
TAIR10AT5G66680.12E-133dolichyl-diphosphooligosaccharide-protein glycosyltransferase 48kDa subunit family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene4475760544764412-
GWHAAZE00000002mRNA4475760544764412-
GWHAAZE00000002exon4476408144764412-
GWHAAZE00000002exon4476289844763034-
GWHAAZE00000002exon4476193844762063-
GWHAAZE00000002exon4476150244761555-
GWHAAZE00000002exon4476124844761361-
GWHAAZE00000002exon4475953844759593-
GWHAAZE00000002exon4475941344759454-
GWHAAZE00000002exon4475898144759056-
GWHAAZE00000002exon4475883144758902-
GWHAAZE00000002exon4475860044758725-
GWHAAZE00000002exon4475840944758513-
GWHAAZE00000002exon4475760544757652-
GWHAAZE00000002five_prime_UTR4476434344764412-
GWHAAZE00000002CDS4476408144764342-
GWHAAZE00000002CDS4476289844763034-
GWHAAZE00000002CDS4476193844762063-
GWHAAZE00000002CDS4476150244761555-
GWHAAZE00000002CDS4476124844761361-
GWHAAZE00000002CDS4475953844759593-
GWHAAZE00000002CDS4475941344759454-
GWHAAZE00000002CDS4475898144759056-
GWHAAZE00000002CDS4475883144758902-
GWHAAZE00000002CDS4475860044758725-
GWHAAZE00000002CDS4475840944758513-
GWHAAZE00000002CDS4475760544757652-
Transcript Sequence

Network for GWHGAAZE007408

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03345.15DDOST_48kD303912.80E-103
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K12670WBP1 Metabolic pathways map01100
N-Glycan biosynthesismap00510
Various types of N-glycan biosynthesismap00513
Protein processing in endoplasmic reticulummap04141

Gene Ontology

GO term OntologyName
GO:0018279biological_processprotein N-linked glycosylation via asparagine
GO:0005789cellular_componentendoplasmic reticulum membrane

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf35.262
SRR3591706second leaf12.385
SRR3591707mature leaf8.498
SRR3591708Shoot apex26.318
SRR3591709Stem16.228
SRR3591710White floral bud15.988
SRR3591711White flower13.994
SRR3591712Green floral bud45.899
SRR3591713Yellow flower6.889
SRP173429 SRR8316895Juvenile bud stage 34.278
SRR8316896Juvenile bud stage 73.203
SRR8316897Juvenile bud stage 29.443
SRR8316894Third green stage 26.782
SRR8316900Third green stage 61.673
SRR8316901Third green stage 65.835
SRR8316898Complete white stage 5.142
SRR8316899Complete white stage 18.744
SRR8316903Complete white stage 7.762
SRR8316902Silver flowering stage1.874
SRR8316904Silver flowering stage3.809
SRR8316905Silver flowering stage1.277
SRR8316906Gold flowering stage 3.167
SRR8316907Gold flowering stage 4.324
SRR8316908Gold flowering stage 3.345
SRP132670SRR6706286Control24.079
SRR6706287Light intensity 50%26.815
SRR6706288Light intensity 20%27.038
CNP0000432CNS0095592Slightly white alabastrum(diploid) 161.960
CNS0095593Slightly white alabastrum(diploid) 243.648
CNS0095594Slightly white alabastrum(diploid) 366.082
CNS0095595Whole white alabastrum(diploid) 248.729
CNS0095596Whole white alabastrum(diploid) 369.777
CNS0095597Whole white alabastrum(diploid) 436.315
CNS0095598Silvery flower (diploied) 110.212
CNS0095599Silvery flower (diploied) 210.642
CNS0095600Silvery flower (diploied) 36.683
CNS0095601Golden flower (diploid) 17.924
CNS0095602Golden flower (diploid) 27.521
CNS0095603Golden flower (diploid) 36.022
CNS0095604Slightly white alabastrum(tetraploid) 174.315
CNS0095605Slightly white alabastrum(tetraploid) 273.623
CNS0095606Slightly white alabastrum(tetraploid) 327.921
CNS0095607Whole white alabastrum(tetraploid) 146.326
CNS0095608Whole white alabastrum(tetraploid) 238.560
CNS0095609Whole white alabastrum(tetraploid) 343.231
CNS0095610Silvery flower (tetraploid) 16.401
CNS0095611Silvery flower (tetraploid) 25.179
CNS0095612Silvery flower (tetraploid) 34.129
CNS0095613Golden flower (tetraploid) 12.828
CNS0095614Golden flower (tetraploid) 24.392
CNS0095615Golden flower (tetraploid) 31.728
CRA001975CRR073297Stem 134.184
CRR073298Stem 230.282
CRR073299Stem 330.187
CRR073300Leaf 126.629
CRR073301Leaf 229.161
CRR073302Leaf 336.802
CRR073303Juvenile bud 127.429
CRR073304Juvenile bud 218.513
CRR073305Juvenile bud 317.906
CRR073306Third green 13.203
CRR073307Third green 21.474
CRR073308Third green 31.913
CRR073309Second white 11.122
CRR073310Second white 20.898
CRR073311Second white 30.372
CRR073312Silver flowering 11.310
CRR073313Silver flowering 21.697
CRR073314Silver flowering 30.496
CRR073315Gold flowering 13.878
CRR073316Gold flowering 25.281
CRR073317Gold flowering 35.059
CRR073318Tawny withering 110.237
CRR073319Tawny withering 210.504
CRR073320Tawny withering 314.504