Detail information of GWHGAAZE007164


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrO04016.1P5CR_ACTCH4.3878E-164RecName: Full=Pyrroline-5-carboxylate reductase; Short=P5C reductase; Short=P5CR [Actinidia chinensis]
Swissprottr|O04016|P5CR_ACTCH2E-166Pyrroline-5-carboxylate reductase
trEMBLtr|M1AP43|M1AP43_SOLTU2E-162Pyrroline-5-carboxylate reductase {ECO:0000256|RuleBase:RU003903}
TAIR10AT5G14800.13E-113pyrroline-5- carboxylate (P5C) reductase

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene3947393739485778-
GWHAAZE00000002mRNA3947393739485778-
GWHAAZE00000002exon3948557539485778-
GWHAAZE00000002exon3948255439482602-
GWHAAZE00000002exon3948133239481423-
GWHAAZE00000002exon3948003939480111-
GWHAAZE00000002exon3947668039476800-
GWHAAZE00000002exon3947463939474744-
GWHAAZE00000002exon3947393739474125-
GWHAAZE00000002CDS3948557539485778-
GWHAAZE00000002CDS3948255439482602-
GWHAAZE00000002CDS3948133239481423-
GWHAAZE00000002CDS3948003939480111-
GWHAAZE00000002CDS3947668039476800-
GWHAAZE00000002CDS3947463939474744-
GWHAAZE00000002CDS3947393739474125-
Transcript Sequence

Network for GWHGAAZE007164

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03807.18F420_oxidored141083.80E-18
PF14748.7P5CR_dimer1702742.10E-41
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K00286proC Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Biosynthesis of amino acidsmap01230
Arginine and proline metabolismmap00330

Gene Ontology

GO term OntologyName
GO:0006561biological_processproline biosynthetic process
GO:0055114biological_processoxidation-reduction process
GO:0004735molecular_functionpyrroline-5-carboxylate reductase activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf38.908
SRR3591706second leaf19.894
SRR3591707mature leaf9.741
SRR3591708Shoot apex43.521
SRR3591709Stem25.572
SRR3591710White floral bud21.406
SRR3591711White flower22.635
SRR3591712Green floral bud35.734
SRR3591713Yellow flower21.215
SRP173429 SRR8316895Juvenile bud stage 31.215
SRR8316896Juvenile bud stage 45.339
SRR8316897Juvenile bud stage 18.944
SRR8316894Third green stage 16.507
SRR8316900Third green stage 39.225
SRR8316901Third green stage 42.376
SRR8316898Complete white stage 9.481
SRR8316899Complete white stage 38.932
SRR8316903Complete white stage 10.530
SRR8316902Silver flowering stage8.959
SRR8316904Silver flowering stage11.373
SRR8316905Silver flowering stage4.173
SRR8316906Gold flowering stage 17.162
SRR8316907Gold flowering stage 18.874
SRR8316908Gold flowering stage 9.645
SRP132670SRR6706286Control40.289
SRR6706287Light intensity 50%38.716
SRR6706288Light intensity 20%42.832
CNP0000432CNS0095592Slightly white alabastrum(diploid) 154.740
CNS0095593Slightly white alabastrum(diploid) 254.127
CNS0095594Slightly white alabastrum(diploid) 349.459
CNS0095595Whole white alabastrum(diploid) 233.858
CNS0095596Whole white alabastrum(diploid) 339.811
CNS0095597Whole white alabastrum(diploid) 431.933
CNS0095598Silvery flower (diploied) 123.663
CNS0095599Silvery flower (diploied) 229.568
CNS0095600Silvery flower (diploied) 318.804
CNS0095601Golden flower (diploid) 123.981
CNS0095602Golden flower (diploid) 217.001
CNS0095603Golden flower (diploid) 314.205
CNS0095604Slightly white alabastrum(tetraploid) 140.457
CNS0095605Slightly white alabastrum(tetraploid) 237.543
CNS0095606Slightly white alabastrum(tetraploid) 325.700
CNS0095607Whole white alabastrum(tetraploid) 122.577
CNS0095608Whole white alabastrum(tetraploid) 213.264
CNS0095609Whole white alabastrum(tetraploid) 321.761
CNS0095610Silvery flower (tetraploid) 18.756
CNS0095611Silvery flower (tetraploid) 29.174
CNS0095612Silvery flower (tetraploid) 35.039
CNS0095613Golden flower (tetraploid) 13.152
CNS0095614Golden flower (tetraploid) 26.050
CNS0095615Golden flower (tetraploid) 31.801
CRA001975CRR073297Stem 143.085
CRR073298Stem 236.005
CRR073299Stem 343.254
CRR073300Leaf 134.919
CRR073301Leaf 241.703
CRR073302Leaf 340.101
CRR073303Juvenile bud 134.443
CRR073304Juvenile bud 220.491
CRR073305Juvenile bud 327.711
CRR073306Third green 16.952
CRR073307Third green 27.735
CRR073308Third green 38.590
CRR073309Second white 19.115
CRR073310Second white 26.247
CRR073311Second white 35.683
CRR073312Silver flowering 17.815
CRR073313Silver flowering 23.767
CRR073314Silver flowering 33.769
CRR073315Gold flowering 118.276
CRR073316Gold flowering 219.890
CRR073317Gold flowering 312.753
CRR073318Tawny withering 136.110
CRR073319Tawny withering 231.017
CRR073320Tawny withering 343.799