Detail information of GWHGAAZE006817


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrKDP41256.14.2957E-130hypothetical protein JCGZ_15663 [Jatropha curcas]
Swissprottr|F4I241|BUB33_ARATH3E-87Mitotic checkpoint protein BUB3.3
trEMBLtr|A0A067KYJ5|A0A067KYJ5_JATCU2E-130Uncharacterized protein {ECO:0000313|EMBL:KDP41256.1}
TAIR10AT1G69400.17E-72Transducin/WD40 repeat-like superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene3256810632572791-
GWHAAZE00000002mRNA3256810632572791-
GWHAAZE00000002exon3257266132572791-
GWHAAZE00000002exon3257138832571470-
GWHAAZE00000002exon3256996132570212-
GWHAAZE00000002exon3256934532569417-
GWHAAZE00000002exon3256893832569015-
GWHAAZE00000002exon3256860232568683-
GWHAAZE00000002exon3256834732568447-
GWHAAZE00000002exon3256810632568187-
GWHAAZE00000002CDS3257266132572791-
GWHAAZE00000002CDS3257138832571470-
GWHAAZE00000002CDS3256996132570212-
GWHAAZE00000002CDS3256934532569417-
GWHAAZE00000002CDS3256893832569015-
GWHAAZE00000002CDS3256860232568683-
GWHAAZE00000002CDS3256834732568447-
GWHAAZE00000002CDS3256810632568187-
Transcript Sequence

Network for GWHGAAZE006817

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00400.33WD4059870.064
Protein Sequence

Gene family

Gene familysubfamily
Ubiquitin FamilyDWD

KEGG pathway

KO Enzyme pathway mapID
K02180BUB3 Cell cycle map04110
Cell cycle - yeastmap04111

Gene Ontology

GO term OntologyName
GO:0005515molecular_functionprotein binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf18.838
SRR3591706second leaf2.654
SRR3591707mature leaf1.903
SRR3591708Shoot apex15.402
SRR3591709Stem9.181
SRR3591710White floral bud0.996
SRR3591711White flower2.675
SRR3591712Green floral bud1.336
SRR3591713Yellow flower1.486
SRP173429 SRR8316895Juvenile bud stage 1.785
SRR8316896Juvenile bud stage 2.990
SRR8316897Juvenile bud stage 0.919
SRR8316894Third green stage 0.903
SRR8316900Third green stage 2.019
SRR8316901Third green stage 1.965
SRR8316898Complete white stage 1.008
SRR8316899Complete white stage 3.155
SRR8316903Complete white stage 0.639
SRR8316902Silver flowering stage0.420
SRR8316904Silver flowering stage0.952
SRR8316905Silver flowering stage0.426
SRR8316906Gold flowering stage 1.523
SRR8316907Gold flowering stage 1.864
SRR8316908Gold flowering stage 0.707
SRP132670SRR6706286Control0.434
SRR6706287Light intensity 50%1.130
SRR6706288Light intensity 20%1.051
CNP0000432CNS0095592Slightly white alabastrum(diploid) 11.308
CNS0095593Slightly white alabastrum(diploid) 20.777
CNS0095594Slightly white alabastrum(diploid) 31.327
CNS0095595Whole white alabastrum(diploid) 20.515
CNS0095596Whole white alabastrum(diploid) 30.742
CNS0095597Whole white alabastrum(diploid) 40.699
CNS0095598Silvery flower (diploied) 11.966
CNS0095599Silvery flower (diploied) 21.499
CNS0095600Silvery flower (diploied) 31.136
CNS0095601Golden flower (diploid) 10.509
CNS0095602Golden flower (diploid) 20.502
CNS0095603Golden flower (diploid) 31.311
CNS0095604Slightly white alabastrum(tetraploid) 11.399
CNS0095605Slightly white alabastrum(tetraploid) 21.810
CNS0095606Slightly white alabastrum(tetraploid) 33.153
CNS0095607Whole white alabastrum(tetraploid) 10.853
CNS0095608Whole white alabastrum(tetraploid) 20.699
CNS0095609Whole white alabastrum(tetraploid) 31.051
CNS0095610Silvery flower (tetraploid) 11.095
CNS0095611Silvery flower (tetraploid) 21.657
CNS0095612Silvery flower (tetraploid) 32.506
CNS0095613Golden flower (tetraploid) 10.767
CNS0095614Golden flower (tetraploid) 20.848
CNS0095615Golden flower (tetraploid) 30.503
CRA001975CRR073297Stem 12.748
CRR073298Stem 21.792
CRR073299Stem 31.563
CRR073300Leaf 11.295
CRR073301Leaf 21.952
CRR073302Leaf 30.923
CRR073303Juvenile bud 11.038
CRR073304Juvenile bud 21.115
CRR073305Juvenile bud 30.786
CRR073306Third green 10.048
CRR073307Third green 20.298
CRR073308Third green 30.170
CRR073309Second white 10.994
CRR073310Second white 20.697
CRR073311Second white 30.227
CRR073312Silver flowering 10.369
CRR073313Silver flowering 20.517
CRR073314Silver flowering 30.077
CRR073315Gold flowering 11.410
CRR073316Gold flowering 22.370
CRR073317Gold flowering 31.716
CRR073318Tawny withering 10.933
CRR073319Tawny withering 21.685
CRR073320Tawny withering 31.225