Detail information of GWHGAAZE006785


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_009628914.10PREDICTED: peroxisomal (S)-2-hydroxy-acid oxidase GLO1-like [Nicotiana tomentosiformis]
Swissprottr|O49506|GLO5_ARATH0Peroxisomal (S)-2-hydroxy-acid oxidase GLO5
trEMBLtr|M1AC27|M1AC27_SOLTU0Uncharacterized protein {ECO:0000313|EnsemblPlants:PGSC0003DMT400019434}
TAIR10AT3G14420.22E-172Aldolase-type TIM barrel family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene3197139331975177-
GWHAAZE00000002mRNA3197139331975177-
GWHAAZE00000002exon3197139331971578-
GWHAAZE00000002exon3197176331971867-
GWHAAZE00000002exon3197207631972176-
GWHAAZE00000002exon3197225631972325-
GWHAAZE00000002exon3197261231972674-
GWHAAZE00000002exon3197277531972841-
GWHAAZE00000002exon3197295231973076-
GWHAAZE00000002exon3197347331973550-
GWHAAZE00000002exon3197366831973714-
GWHAAZE00000002exon3197480431974928-
GWHAAZE00000002exon3197504131975177-
GWHAAZE00000002CDS3197504131975177-
GWHAAZE00000002CDS3197480431974928-
GWHAAZE00000002CDS3197366831973714-
GWHAAZE00000002CDS3197347331973550-
GWHAAZE00000002CDS3197295231973076-
GWHAAZE00000002CDS3197277531972841-
GWHAAZE00000002CDS3197261231972674-
GWHAAZE00000002CDS3197225631972325-
GWHAAZE00000002CDS3197207631972176-
GWHAAZE00000002CDS3197176331971867-
GWHAAZE00000002CDS3197139331971578-
Transcript Sequence

Network for GWHGAAZE006785

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01070.19FMN_dh133554.20E-136
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K11517HAO Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Microbial metabolism in diverse environmentsmap01120
Carbon metabolismmap01200
Glyoxylate and dicarboxylate metabolismmap00630
Peroxisomemap04146

Gene Ontology

GO term OntologyName
GO:0055114biological_processoxidation-reduction process
GO:0016491molecular_functionoxidoreductase activity
GO:0010181molecular_functionFMN binding
GO:0003824molecular_functioncatalytic activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf5.607
SRR3591706second leaf1.452
SRR3591707mature leaf0.364
SRR3591708Shoot apex5.576
SRR3591709Stem13.598
SRR3591710White floral bud6.200
SRR3591711White flower11.770
SRR3591712Green floral bud1.888
SRR3591713Yellow flower111.953
SRP173429 SRR8316895Juvenile bud stage 2.999
SRR8316896Juvenile bud stage 8.775
SRR8316897Juvenile bud stage 3.471
SRR8316894Third green stage 1.328
SRR8316900Third green stage 2.723
SRR8316901Third green stage 3.867
SRR8316898Complete white stage 9.880
SRR8316899Complete white stage 10.368
SRR8316903Complete white stage 7.920
SRR8316902Silver flowering stage19.610
SRR8316904Silver flowering stage24.373
SRR8316905Silver flowering stage8.761
SRR8316906Gold flowering stage 57.754
SRR8316907Gold flowering stage 55.303
SRR8316908Gold flowering stage 162.888
SRP132670SRR6706286Control9.804
SRR6706287Light intensity 50%5.807
SRR6706288Light intensity 20%3.411
CNP0000432CNS0095592Slightly white alabastrum(diploid) 12.557
CNS0095593Slightly white alabastrum(diploid) 23.502
CNS0095594Slightly white alabastrum(diploid) 34.451
CNS0095595Whole white alabastrum(diploid) 22.983
CNS0095596Whole white alabastrum(diploid) 30.766
CNS0095597Whole white alabastrum(diploid) 41.558
CNS0095598Silvery flower (diploied) 116.654
CNS0095599Silvery flower (diploied) 27.573
CNS0095600Silvery flower (diploied) 339.566
CNS0095601Golden flower (diploid) 121.132
CNS0095602Golden flower (diploid) 268.518
CNS0095603Golden flower (diploid) 367.010
CNS0095604Slightly white alabastrum(tetraploid) 11.492
CNS0095605Slightly white alabastrum(tetraploid) 20.608
CNS0095606Slightly white alabastrum(tetraploid) 33.529
CNS0095607Whole white alabastrum(tetraploid) 11.063
CNS0095608Whole white alabastrum(tetraploid) 20.555
CNS0095609Whole white alabastrum(tetraploid) 30.184
CNS0095610Silvery flower (tetraploid) 1192.868
CNS0095611Silvery flower (tetraploid) 248.332
CNS0095612Silvery flower (tetraploid) 321.355
CNS0095613Golden flower (tetraploid) 1174.390
CNS0095614Golden flower (tetraploid) 2121.493
CNS0095615Golden flower (tetraploid) 336.540
CRA001975CRR073297Stem 13.169
CRR073298Stem 22.835
CRR073299Stem 32.392
CRR073300Leaf 11.039
CRR073301Leaf 21.074
CRR073302Leaf 31.066
CRR073303Juvenile bud 10.291
CRR073304Juvenile bud 20.308
CRR073305Juvenile bud 31.065
CRR073306Third green 117.962
CRR073307Third green 212.405
CRR073308Third green 313.470
CRR073309Second white 17.946
CRR073310Second white 23.101
CRR073311Second white 34.654
CRR073312Silver flowering 126.730
CRR073313Silver flowering 231.908
CRR073314Silver flowering 342.540
CRR073315Gold flowering 10.875
CRR073316Gold flowering 21.225
CRR073317Gold flowering 37.349
CRR073318Tawny withering 189.437
CRR073319Tawny withering 282.397
CRR073320Tawny withering 324.883