Detail information of GWHGAAZE006687


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002273017.21.8737E-116PREDICTED: trihelix transcription factor ASIL1-like isoform X5 [Vitis vinifera]
Swissprottr|Q9LJG8|ASIL2_ARATH9E-34Trihelix transcription factor ASIL2 {ECO:0000305}
trEMBLtr|F6HM98|F6HM98_VITVI2E-115Putative uncharacterized protein {ECO:0000313|EMBL:CCB55686.1}
TAIR10AT3G58630.14E-54sequence-specific DNA binding transcription factors

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene3015770530159028-
GWHAAZE00000002mRNA3015770530159028-
GWHAAZE00000002exon3015770530158107-
GWHAAZE00000002exon3015864630159028-
GWHAAZE00000002CDS3015864630159028-
GWHAAZE00000002CDS3015770530158107-
Transcript Sequence

Network for GWHGAAZE006687

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13837.7Myb_DNA-bind_4191121.60E-26
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyTrihelix

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf16.987
SRR3591706second leaf14.096
SRR3591707mature leaf19.282
SRR3591708Shoot apex21.018
SRR3591709Stem20.311
SRR3591710White floral bud21.424
SRR3591711White flower13.731
SRR3591712Green floral bud24.178
SRR3591713Yellow flower14.959
SRP173429 SRR8316895Juvenile bud stage 12.849
SRR8316896Juvenile bud stage 16.039
SRR8316897Juvenile bud stage 7.528
SRR8316894Third green stage 7.717
SRR8316900Third green stage 19.732
SRR8316901Third green stage 19.689
SRR8316898Complete white stage 6.241
SRR8316899Complete white stage 21.419
SRR8316903Complete white stage 10.398
SRR8316902Silver flowering stage2.915
SRR8316904Silver flowering stage5.575
SRR8316905Silver flowering stage3.003
SRR8316906Gold flowering stage 9.198
SRR8316907Gold flowering stage 9.646
SRR8316908Gold flowering stage 10.601
SRP132670SRR6706286Control17.917
SRR6706287Light intensity 50%16.008
SRR6706288Light intensity 20%16.730
CNP0000432CNS0095592Slightly white alabastrum(diploid) 119.149
CNS0095593Slightly white alabastrum(diploid) 215.268
CNS0095594Slightly white alabastrum(diploid) 320.016
CNS0095595Whole white alabastrum(diploid) 219.860
CNS0095596Whole white alabastrum(diploid) 323.558
CNS0095597Whole white alabastrum(diploid) 424.644
CNS0095598Silvery flower (diploied) 112.303
CNS0095599Silvery flower (diploied) 211.201
CNS0095600Silvery flower (diploied) 312.402
CNS0095601Golden flower (diploid) 116.576
CNS0095602Golden flower (diploid) 215.839
CNS0095603Golden flower (diploid) 314.616
CNS0095604Slightly white alabastrum(tetraploid) 119.984
CNS0095605Slightly white alabastrum(tetraploid) 224.763
CNS0095606Slightly white alabastrum(tetraploid) 324.073
CNS0095607Whole white alabastrum(tetraploid) 124.738
CNS0095608Whole white alabastrum(tetraploid) 222.164
CNS0095609Whole white alabastrum(tetraploid) 321.620
CNS0095610Silvery flower (tetraploid) 112.936
CNS0095611Silvery flower (tetraploid) 211.872
CNS0095612Silvery flower (tetraploid) 315.396
CNS0095613Golden flower (tetraploid) 110.168
CNS0095614Golden flower (tetraploid) 211.952
CNS0095615Golden flower (tetraploid) 314.074
CRA001975CRR073297Stem 123.985
CRR073298Stem 221.680
CRR073299Stem 323.846
CRR073300Leaf 127.244
CRR073301Leaf 222.340
CRR073302Leaf 319.750
CRR073303Juvenile bud 119.423
CRR073304Juvenile bud 214.158
CRR073305Juvenile bud 321.170
CRR073306Third green 111.042
CRR073307Third green 215.725
CRR073308Third green 314.075
CRR073309Second white 113.034
CRR073310Second white 211.924
CRR073311Second white 310.845
CRR073312Silver flowering 110.961
CRR073313Silver flowering 213.901
CRR073314Silver flowering 311.858
CRR073315Gold flowering 114.848
CRR073316Gold flowering 211.005
CRR073317Gold flowering 37.836
CRR073318Tawny withering 120.171
CRR073319Tawny withering 214.255
CRR073320Tawny withering 314.219