Detail information of GWHGAAZE006429


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_011095865.10PREDICTED: probable galacturonosyltransferase 4 [Sesamum indicum]
Swissprottr|Q93ZX7|GAUT4_ARATH0Probable galacturonosyltransferase 4
trEMBLtr|A0A068U7Q8|A0A068U7Q8_COFCA0Coffea canephora DH200=94 genomic scaffold, scaffold_12 {ECO:0000313|EMBL:CDP04556.1}
TAIR10AT5G47780.10galacturonosyltransferase 4

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene2548345525486981-
GWHAAZE00000002mRNA2548345525486981-
GWHAAZE00000002exon2548345525483730-
GWHAAZE00000002exon2548401425484589-
GWHAAZE00000002exon2548478425485141-
GWHAAZE00000002exon2548534425485615-
GWHAAZE00000002exon2548650725486715-
GWHAAZE00000002exon2548684325486981-
GWHAAZE00000002CDS2548684325486981-
GWHAAZE00000002CDS2548650725486715-
GWHAAZE00000002CDS2548534425485615-
GWHAAZE00000002CDS2548478425485141-
GWHAAZE00000002CDS2548401425484589-
GWHAAZE00000002CDS2548345525483730-
Transcript Sequence

Network for GWHGAAZE006429

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01501.21Glyco_transf_82715822.20E-95
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K13648GAUT Metabolic pathways map01100
Amino sugar and nucleotide sugar metabolismmap00520

Gene Ontology

GO term OntologyName
GO:0016757molecular_functiontransferase activity, transferring glycosyl groups

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf91.183
SRR3591706second leaf95.821
SRR3591707mature leaf64.644
SRR3591708Shoot apex65.517
SRR3591709Stem65.697
SRR3591710White floral bud42.132
SRR3591711White flower30.074
SRR3591712Green floral bud56.560
SRR3591713Yellow flower18.376
SRP173429 SRR8316895Juvenile bud stage 40.278
SRR8316896Juvenile bud stage 45.852
SRR8316897Juvenile bud stage 26.371
SRR8316894Third green stage 21.681
SRR8316900Third green stage 61.608
SRR8316901Third green stage 61.064
SRR8316898Complete white stage 15.784
SRR8316899Complete white stage 80.584
SRR8316903Complete white stage 24.480
SRR8316902Silver flowering stage8.336
SRR8316904Silver flowering stage14.256
SRR8316905Silver flowering stage5.194
SRR8316906Gold flowering stage 13.929
SRR8316907Gold flowering stage 15.193
SRR8316908Gold flowering stage 21.485
SRP132670SRR6706286Control33.935
SRR6706287Light intensity 50%42.560
SRR6706288Light intensity 20%45.194
CNP0000432CNS0095592Slightly white alabastrum(diploid) 141.216
CNS0095593Slightly white alabastrum(diploid) 248.985
CNS0095594Slightly white alabastrum(diploid) 336.022
CNS0095595Whole white alabastrum(diploid) 234.272
CNS0095596Whole white alabastrum(diploid) 332.015
CNS0095597Whole white alabastrum(diploid) 433.558
CNS0095598Silvery flower (diploied) 143.845
CNS0095599Silvery flower (diploied) 233.976
CNS0095600Silvery flower (diploied) 326.379
CNS0095601Golden flower (diploid) 129.781
CNS0095602Golden flower (diploid) 233.112
CNS0095603Golden flower (diploid) 332.584
CNS0095604Slightly white alabastrum(tetraploid) 157.012
CNS0095605Slightly white alabastrum(tetraploid) 248.038
CNS0095606Slightly white alabastrum(tetraploid) 3101.142
CNS0095607Whole white alabastrum(tetraploid) 136.263
CNS0095608Whole white alabastrum(tetraploid) 228.136
CNS0095609Whole white alabastrum(tetraploid) 356.973
CNS0095610Silvery flower (tetraploid) 130.422
CNS0095611Silvery flower (tetraploid) 231.933
CNS0095612Silvery flower (tetraploid) 318.383
CNS0095613Golden flower (tetraploid) 113.180
CNS0095614Golden flower (tetraploid) 223.346
CNS0095615Golden flower (tetraploid) 319.510
CRA001975CRR073297Stem 167.181
CRR073298Stem 264.518
CRR073299Stem 363.765
CRR073300Leaf 173.584
CRR073301Leaf 266.310
CRR073302Leaf 359.795
CRR073303Juvenile bud 166.894
CRR073304Juvenile bud 254.987
CRR073305Juvenile bud 3100.656
CRR073306Third green 110.783
CRR073307Third green 212.485
CRR073308Third green 312.386
CRR073309Second white 16.003
CRR073310Second white 23.867
CRR073311Second white 35.170
CRR073312Silver flowering 12.926
CRR073313Silver flowering 23.839
CRR073314Silver flowering 32.199
CRR073315Gold flowering 165.437
CRR073316Gold flowering 279.552
CRR073317Gold flowering 354.479
CRR073318Tawny withering 169.604
CRR073319Tawny withering 252.929
CRR073320Tawny withering 376.096