Detail information of GWHGAAZE006212


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002532578.10trehalose-6-phosphate synthase, putative [Ricinus communis]
Swissprottr|Q9SUW0|TPPG_ARATH0Probable trehalose-phosphate phosphatase G
trEMBLtr|B9T2V9|B9T2V9_RICCO0Trehalose 6-phosphate phosphatase {ECO:0000256|RuleBase:RU361117}
TAIR10AT4G22590.11E-149Haloacid dehalogenase-like hydrolase (HAD) superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene2119193321194827-
GWHAAZE00000002mRNA2119193321194827-
GWHAAZE00000002exon2119453721194827-
GWHAAZE00000002exon2119428021194420-
GWHAAZE00000002exon2119393221194003-
GWHAAZE00000002exon2119367321193798-
GWHAAZE00000002exon2119349621193552-
GWHAAZE00000002exon2119329821193399-
GWHAAZE00000002exon2119310121193178-
GWHAAZE00000002exon2119293521193004-
GWHAAZE00000002exon2119253621192606-
GWHAAZE00000002exon2119231821192410-
GWHAAZE00000002exon2119193321192216-
GWHAAZE00000002CDS2119453721194827-
GWHAAZE00000002CDS2119428021194420-
GWHAAZE00000002CDS2119393221194003-
GWHAAZE00000002CDS2119367321193798-
GWHAAZE00000002CDS2119349621193552-
GWHAAZE00000002CDS2119329821193399-
GWHAAZE00000002CDS2119310121193178-
GWHAAZE00000002CDS2119293521193004-
GWHAAZE00000002CDS2119253621192606-
GWHAAZE00000002CDS2119231821192410-
GWHAAZE00000002CDS2119216321192216-
GWHAAZE00000002three_prime_UTR2119193321192162-
Transcript Sequence

Network for GWHGAAZE006212

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02358.17Trehalose_PPase1223667.60E-74
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K01087otsB Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Starch and sucrose metabolismmap00500

Gene Ontology

GO term OntologyName
GO:0005992biological_processtrehalose biosynthetic process
GO:0003824molecular_functioncatalytic activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf5.810
SRR3591706second leaf6.561
SRR3591707mature leaf7.220
SRR3591708Shoot apex10.317
SRR3591709Stem2.635
SRR3591710White floral bud65.302
SRR3591711White flower33.503
SRR3591712Green floral bud14.774
SRR3591713Yellow flower41.675
SRP173429 SRR8316895Juvenile bud stage 7.376
SRR8316896Juvenile bud stage 16.118
SRR8316897Juvenile bud stage 6.920
SRR8316894Third green stage 5.775
SRR8316900Third green stage 18.272
SRR8316901Third green stage 18.995
SRR8316898Complete white stage 63.638
SRR8316899Complete white stage 15.644
SRR8316903Complete white stage 131.472
SRR8316902Silver flowering stage115.532
SRR8316904Silver flowering stage137.298
SRR8316905Silver flowering stage55.011
SRR8316906Gold flowering stage 159.083
SRR8316907Gold flowering stage 145.800
SRR8316908Gold flowering stage 96.581
SRP132670SRR6706286Control4.940
SRR6706287Light intensity 50%5.800
SRR6706288Light intensity 20%4.251
CNP0000432CNS0095592Slightly white alabastrum(diploid) 122.061
CNS0095593Slightly white alabastrum(diploid) 223.968
CNS0095594Slightly white alabastrum(diploid) 325.202
CNS0095595Whole white alabastrum(diploid) 225.733
CNS0095596Whole white alabastrum(diploid) 324.073
CNS0095597Whole white alabastrum(diploid) 422.920
CNS0095598Silvery flower (diploied) 19.979
CNS0095599Silvery flower (diploied) 211.782
CNS0095600Silvery flower (diploied) 315.834
CNS0095601Golden flower (diploid) 19.373
CNS0095602Golden flower (diploid) 219.501
CNS0095603Golden flower (diploid) 317.991
CNS0095604Slightly white alabastrum(tetraploid) 121.069
CNS0095605Slightly white alabastrum(tetraploid) 221.483
CNS0095606Slightly white alabastrum(tetraploid) 36.840
CNS0095607Whole white alabastrum(tetraploid) 126.988
CNS0095608Whole white alabastrum(tetraploid) 227.489
CNS0095609Whole white alabastrum(tetraploid) 312.904
CNS0095610Silvery flower (tetraploid) 114.209
CNS0095611Silvery flower (tetraploid) 25.416
CNS0095612Silvery flower (tetraploid) 318.926
CNS0095613Golden flower (tetraploid) 133.206
CNS0095614Golden flower (tetraploid) 215.196
CNS0095615Golden flower (tetraploid) 3128.990
CRA001975CRR073297Stem 14.056
CRR073298Stem 24.040
CRR073299Stem 32.499
CRR073300Leaf 19.182
CRR073301Leaf 29.111
CRR073302Leaf 35.135
CRR073303Juvenile bud 15.473
CRR073304Juvenile bud 26.086
CRR073305Juvenile bud 34.837
CRR073306Third green 192.470
CRR073307Third green 291.547
CRR073308Third green 388.855
CRR073309Second white 178.805
CRR073310Second white 2118.432
CRR073311Second white 3124.920
CRR073312Silver flowering 1180.995
CRR073313Silver flowering 2102.846
CRR073314Silver flowering 3102.427
CRR073315Gold flowering 19.220
CRR073316Gold flowering 25.375
CRR073317Gold flowering 32.760
CRR073318Tawny withering 17.064
CRR073319Tawny withering 28.333
CRR073320Tawny withering 38.064