Gene detail

Detail information of GWHGAAZE005912

Functional Annotation

Database	Orthologs	Annotation
Nr	XP_011070358.1	PREDICTED: glutamine-dependent NAD(+) synthetase [Sesamum indicum]
Swissprot	tr\|Q9C723\|NADE_ARATH	Glutamine-dependent NAD(+) synthetase
trEMBL	tr\|A0A068UB99\|A0A068UB99_COFCA	Coffea canephora DH200=94 genomic scaffold, scaffold_18 {ECO:0000313\|EMBL:CDP05726.1}
TAIR10	AT1G55090.1	carbon-nitrogen hydrolase family protein

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000002	gene	16045271	16053864	+
GWHAAZE00000002	mRNA	16045271	16053864	+
GWHAAZE00000002	exon	16045271	16045464	+
GWHAAZE00000002	exon	16046405	16046494	+
GWHAAZE00000002	exon	16046579	16046710	+
GWHAAZE00000002	exon	16047498	16047721	+
GWHAAZE00000002	exon	16047940	16048043	+
GWHAAZE00000002	exon	16048491	16048625	+
GWHAAZE00000002	exon	16049275	16049443	+
GWHAAZE00000002	exon	16050037	16050172	+
GWHAAZE00000002	exon	16050563	16050701	+
GWHAAZE00000002	exon	16050881	16051057	+
GWHAAZE00000002	exon	16051289	16051456	+
GWHAAZE00000002	exon	16052161	16052256	+
GWHAAZE00000002	exon	16053414	16053542	+
GWHAAZE00000002	exon	16053646	16053864	+
GWHAAZE00000002	CDS	16045271	16045464	+
GWHAAZE00000002	CDS	16046405	16046494	+
GWHAAZE00000002	CDS	16046579	16046710	+
GWHAAZE00000002	CDS	16047498	16047721	+
GWHAAZE00000002	CDS	16047940	16048043	+
GWHAAZE00000002	CDS	16048491	16048625	+
GWHAAZE00000002	CDS	16049275	16049443	+
GWHAAZE00000002	CDS	16050037	16050172	+
GWHAAZE00000002	CDS	16050563	16050701	+
GWHAAZE00000002	CDS	16050881	16051057	+
GWHAAZE00000002	CDS	16051289	16051456	+
GWHAAZE00000002	CDS	16052161	16052256	+
GWHAAZE00000002	CDS	16053414	16053542	+
GWHAAZE00000002	CDS	16053646	16053864	+

Transcript Sequence
>GWHTAAZE005920 ATGAGGTTGTTGAAGGTAGCCACTTGCAATTTGAATCAATGGGCTATGGATTTCGATTGCAATATGAGCAACATTAAAGAATCTATTTCTAGGGCTAAACAAGCTGGTGCTGTTATCAGGCTTGGTCCTGAACTCGAAATCACTGGCTATGGTTGTGAAGACCATTTTTTGGAACTCGATACGATTACTCATGCGTGGGACTGCTTGAAGGATATTTTACTTGGTGATTGGACAGATGGCATATTGTGTAGTTTCGGCATGCCTGTTATCAAAGGATCAGAGCGGGAACTCCGATGGTTTACAACGTGGAAGGAGAAGGAGCAACTTGTGGATTTTATGCTCCCACCTGAAGTATCCGAGGTCCTGTCCCAGCAAACAGTTCCTTTTGGCTATGGTTTCATTCAATTTTTAGACACAGCTGTTGCAGCTGAAATTTGTGAAGAGCTTTTTAGTCCTATGCCCCCTCATGCAGAGCTTGCACTGAATGGTGTTGAAGTATTTATGAATGCTAGCGGAAGTCACCACCAACTACGAAAGCTTGATCTTCGCCTTCGTGCTTTCATAGGTGCCACACATACTCGCGGAGGAGTTTACATGTACAGTAATCACCAAGGATGTGATGGTAGCCGCCTGTATTATGACGGATGTGCTTGTGTAGTTGTGAATGGAGATGTGGTTGCTCAAGGCTCTCAGTTCTCTTTGAAGGATGTCGAGCTTGCTGTTGCTCAATTTGATCTAGATGCGGTCGCTAGTCTTAGAGGCTCTATTAGTAGTTTTCAAGAACAAGCGAGTAACAAACCAAAAGTTTCCTCAGTCATAGTACCATACAAGCTTTGTCAGTCCTTTAACCTCCAAATGTCCCTTTCAAGTCCCCTAAAGATTAGATACCACTCTCCTGAGGAGGAGATAGCTTTTGGTCCTGCGTGCTGGCTATGGGACTATTTAAGAAGAAGTGGAGCTTCTGGATTTTTACTTCCACTTTCTGGTGGGGCTGATAGCTCCTCTGTAGCTGCTATTGTTGGGTGCATGTGCCAACTCGTAGTAAAAGAAATTACAGAAGGGGATGAACAAGTAAAAGTTGATGCTATTAGAATTGGCCATTACACTGATGGAAAGTTTCCTACTGACAGTCAAGAATTTGCAAAGCGCATATTTTATACTGTATTCATGGGCTCTGAAAATAGTTCTGATGCCACGAGAACACGGGCAAAGGTACTGGCAGATGAGATTGGATCATGGCATCTTGATGTTTCTATAGATGGTGTAGTTTCTGCCCTACTCTCTTTATTTCAAACTCTCACTGGGAAGCGACCTCGCTACAAGGTGGACGGTGGTACAAACATCGAAAACTTAGGGTTGCAGAACATTCAAGCTCGAATTAGAATGGTTCTGGCATTTATGTTAGCATCACTCTTGCCATGGGTTCACAACAAACCAGGTTTTTATCTGGTTTTGGGAAGCTCCAATGTGGATGAAGCACTGCGTGGTTACCTAACAAAGTATGATTGCAGTTCGGCAGATATAAATCCCATTGGAAGTATTAGTAAACAGGATCTTCGAACATTTCTGCGATGGGCTGCTGCCAATCTTGGTTACTCGTCTTTAGCAGAGATTGAAGCTGCTCCCCCCACTGCTGAACTGGAGCCCATTCGATCTGATTATAGCCAGCTGGATGAAGTTGACATGGGAATGACATATGAGGAGCTTTCGGTATATGGAAGGCTACGTAAGATCTTCCGTTGCGGTCCTGTATCTATGTTCAAGAATCTCTGCTTTAAGTGGGGTGCAAAACTAACTCCGCTGGAGGTGGCAGACAAAGTGAAGCACTTCTTCAAGTACTATTCCATCAATCGACACAAGATGACTGTATTAACACCGTCCTATCATGCCGAGAGCTATTCACCAGAAGACAATAGGTTCGATCTAAGACAGTTTTTATACAATGCAAGATGGCCGTATCAATTCAGGAAGATTGACGAACTGGTCAGAGGGTTTGATGGTGATGTTGTTGCTATTACAAAACCAGCTGACCATGAAGACAAGAATGCTAGCTCAGTTGGTGGTATGGGTGTTGTGGCAGCTGGTGCTGGCGATCCGAGAGCTGGGGTTTAA

Network for GWHGAAZE005912

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00795.23	CN_hydrolase	5	253	2.50E-20
PF02540.18	NAD_synthase	310	570	2.60E-26

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K01950	E6.3.5.1, NADSYN1, QNS1, nadE	Metabolic pathways	map01100
K01950	E6.3.5.1, NADSYN1, QNS1, nadE	Nicotinate and nicotinamide metabolism	map00760

Gene Ontology

GO term	Ontology	Name
GO:0009435	biological_process	NAD biosynthetic process
GO:0006807	biological_process	nitrogen compound metabolic process
GO:0005737	cellular_component	cytoplasm
GO:0003952	molecular_function	NAD+ synthase (glutamine-hydrolyzing) activity
GO:0005524	molecular_function	ATP binding
GO:0004359	molecular_function	glutaminase activity

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	30.758
	SRR3591706	second leaf	28.605
	SRR3591707	mature leaf	37.450
	SRR3591708	Shoot apex	23.355
	SRR3591709	Stem	22.421
	SRR3591710	White floral bud	24.580
	SRR3591711	White flower	27.642
	SRR3591712	Green floral bud	21.802
	SRR3591713	Yellow flower	16.095
SRP173429	SRR8316895	Juvenile bud stage	37.769
	SRR8316896	Juvenile bud stage	40.109
	SRR8316897	Juvenile bud stage	35.729
	SRR8316894	Third green stage	10.898
	SRR8316900	Third green stage	28.817
	SRR8316901	Third green stage	34.097
	SRR8316898	Complete white stage	12.895
	SRR8316899	Complete white stage	38.781
	SRR8316903	Complete white stage	23.915
	SRR8316902	Silver flowering stage	20.674
	SRR8316904	Silver flowering stage	23.676
	SRR8316905	Silver flowering stage	12.689
	SRR8316906	Gold flowering stage	23.059
	SRR8316907	Gold flowering stage	28.217
	SRR8316908	Gold flowering stage	25.750
SRP132670	SRR6706286	Control	25.333
	SRR6706287	Light intensity 50%	31.822
	SRR6706288	Light intensity 20%	32.074
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	32.598
	CNS0095593	Slightly white alabastrum(diploid) 2	27.884
	CNS0095594	Slightly white alabastrum(diploid) 3	33.879
	CNS0095595	Whole white alabastrum(diploid) 2	23.199
	CNS0095596	Whole white alabastrum(diploid) 3	13.615
	CNS0095597	Whole white alabastrum(diploid) 4	19.538
	CNS0095598	Silvery flower (diploied) 1	25.209
	CNS0095599	Silvery flower (diploied) 2	22.710
	CNS0095600	Silvery flower (diploied) 3	24.340
	CNS0095601	Golden flower (diploid) 1	28.466
	CNS0095602	Golden flower (diploid) 2	23.337
	CNS0095603	Golden flower (diploid) 3	22.348
	CNS0095604	Slightly white alabastrum(tetraploid) 1	13.265
	CNS0095605	Slightly white alabastrum(tetraploid) 2	11.916
	CNS0095606	Slightly white alabastrum(tetraploid) 3	20.542
	CNS0095607	Whole white alabastrum(tetraploid) 1	8.488
	CNS0095608	Whole white alabastrum(tetraploid) 2	9.575
	CNS0095609	Whole white alabastrum(tetraploid) 3	17.161
	CNS0095610	Silvery flower (tetraploid) 1	17.552
	CNS0095611	Silvery flower (tetraploid) 2	12.283
	CNS0095612	Silvery flower (tetraploid) 3	16.818
	CNS0095613	Golden flower (tetraploid) 1	7.476
	CNS0095614	Golden flower (tetraploid) 2	10.990
	CNS0095615	Golden flower (tetraploid) 3	7.994
CRA001975	CRR073297	Stem 1	30.670
	CRR073298	Stem 2	25.972
	CRR073299	Stem 3	22.118
	CRR073300	Leaf 1	32.523
	CRR073301	Leaf 2	30.308
	CRR073302	Leaf 3	26.774
	CRR073303	Juvenile bud 1	27.521
	CRR073304	Juvenile bud 2	20.771
	CRR073305	Juvenile bud 3	30.060
	CRR073306	Third green 1	20.263
	CRR073307	Third green 2	20.387
	CRR073308	Third green 3	21.265
	CRR073309	Second white 1	16.474
	CRR073310	Second white 2	16.681
	CRR073311	Second white 3	18.933
	CRR073312	Silver flowering 1	17.067
	CRR073313	Silver flowering 2	17.414
	CRR073314	Silver flowering 3	18.025
	CRR073315	Gold flowering 1	30.100
	CRR073316	Gold flowering 2	48.123
	CRR073317	Gold flowering 3	32.317
	CRR073318	Tawny withering 1	30.782
	CRR073319	Tawny withering 2	41.442
	CRR073320	Tawny withering 3	33.620