Detail information of GWHGAAZE005678


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_008227262.11.912E-138PREDICTED: bifunctional monodehydroascorbate reductase and carbonic anhydrase nectarin-3-like isoform X1 [Prunus mume]
Swissprottr|Q8L817|ATCA7_ARATH2E-97Alpha carbonic anhydrase 7 (Precursor)
trEMBLtr|W9RIU8|W9RIU8_9ROSA3E-136Uncharacterized protein {ECO:0000313|EMBL:EXB75896.1}
TAIR10AT1G08080.14E-79alpha carbonic anhydrase 7

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene1182919711832831-
GWHAAZE00000002mRNA1182919711832831-
GWHAAZE00000002exon1182919711829277-
GWHAAZE00000002exon1182940011829453-
GWHAAZE00000002exon1182959211829756-
GWHAAZE00000002exon1183033311830447-
GWHAAZE00000002exon1183075111830857-
GWHAAZE00000002exon1183241711832672-
GWHAAZE00000002exon1183276711832831-
GWHAAZE00000002CDS1183276711832831-
GWHAAZE00000002CDS1183241711832672-
GWHAAZE00000002CDS1183075111830857-
GWHAAZE00000002CDS1183033311830447-
GWHAAZE00000002CDS1182959211829756-
GWHAAZE00000002CDS1182940011829453-
GWHAAZE00000002CDS1182919711829277-
Transcript Sequence

Network for GWHGAAZE005678

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00194.22Carb_anhydrase422729.50E-44
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K01674cah Metabolic pathways map01100
Nitrogen metabolismmap00910

Gene Ontology

GO term OntologyName
GO:0004089molecular_functioncarbonate dehydratase activity
GO:0008270molecular_functionzinc ion binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf80.981
SRR3591706second leaf3.323
SRR3591707mature leaf1.175
SRR3591708Shoot apex12.623
SRR3591709Stem112.014
SRR3591710White floral bud45.887
SRR3591711White flower10.954
SRR3591712Green floral bud8.855
SRR3591713Yellow flower0.463
SRP173429 SRR8316895Juvenile bud stage 3.551
SRR8316896Juvenile bud stage 3.194
SRR8316897Juvenile bud stage 5.801
SRR8316894Third green stage 0.609
SRR8316900Third green stage 0.469
SRR8316901Third green stage 2.392
SRR8316898Complete white stage 1.192
SRR8316899Complete white stage 4.309
SRR8316903Complete white stage 0.785
SRR8316902Silver flowering stage1.537
SRR8316904Silver flowering stage2.960
SRR8316905Silver flowering stage0.352
SRR8316906Gold flowering stage 0.774
SRR8316907Gold flowering stage 0.656
SRR8316908Gold flowering stage 2.093
SRP132670SRR6706286Control0.788
SRR6706287Light intensity 50%2.109
SRR6706288Light intensity 20%0.745
CNP0000432CNS0095592Slightly white alabastrum(diploid) 14.371
CNS0095593Slightly white alabastrum(diploid) 217.841
CNS0095594Slightly white alabastrum(diploid) 310.288
CNS0095595Whole white alabastrum(diploid) 25.884
CNS0095596Whole white alabastrum(diploid) 30.767
CNS0095597Whole white alabastrum(diploid) 42.420
CNS0095598Silvery flower (diploied) 14.212
CNS0095599Silvery flower (diploied) 210.735
CNS0095600Silvery flower (diploied) 33.359
CNS0095601Golden flower (diploid) 15.558
CNS0095602Golden flower (diploid) 23.751
CNS0095603Golden flower (diploid) 33.429
CNS0095604Slightly white alabastrum(tetraploid) 10.766
CNS0095605Slightly white alabastrum(tetraploid) 20.707
CNS0095606Slightly white alabastrum(tetraploid) 31.107
CNS0095607Whole white alabastrum(tetraploid) 11.402
CNS0095608Whole white alabastrum(tetraploid) 20.182
CNS0095609Whole white alabastrum(tetraploid) 30.000
CNS0095610Silvery flower (tetraploid) 10.245
CNS0095611Silvery flower (tetraploid) 21.904
CNS0095612Silvery flower (tetraploid) 34.853
CNS0095613Golden flower (tetraploid) 10.724
CNS0095614Golden flower (tetraploid) 20.107
CNS0095615Golden flower (tetraploid) 33.790
CRA001975CRR073297Stem 13.248
CRR073298Stem 23.951
CRR073299Stem 33.376
CRR073300Leaf 11.591
CRR073301Leaf 23.291
CRR073302Leaf 34.357
CRR073303Juvenile bud 14.545
CRR073304Juvenile bud 212.834
CRR073305Juvenile bud 32.938
CRR073306Third green 113.357
CRR073307Third green 217.877
CRR073308Third green 311.908
CRR073309Second white 10.640
CRR073310Second white 22.104
CRR073311Second white 31.419
CRR073312Silver flowering 110.233
CRR073313Silver flowering 211.898
CRR073314Silver flowering 34.203
CRR073315Gold flowering 110.462
CRR073316Gold flowering 28.769
CRR073317Gold flowering 39.831
CRR073318Tawny withering 1126.468
CRR073319Tawny withering 2247.860
CRR073320Tawny withering 3168.234