Gene detail

Detail information of GWHGAAZE005303

Functional Annotation

Database	Orthologs	Annotation
Nr	XP_007033491.1	Malectin/receptor-like protein kinase family protein [Theobroma cacao]
Swissprot	tr\|Q9SCZ4\|FERON_ARATH	Receptor-like protein kinase FERONIA (Precursor)
trEMBL	tr\|A0A061EJ18\|A0A061EJ18_THECC	Malectin/receptor-like protein kinase family protein {ECO:0000313\|EMBL:EOY04417.1}
TAIR10	AT3G51550.1	Malectin/receptor-like protein kinase family protein

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000002	gene	5769989	5772667	+
GWHAAZE00000002	mRNA	5769989	5772667	+
GWHAAZE00000002	exon	5769989	5772667	+
GWHAAZE00000002	CDS	5769989	5772667	+

Transcript Sequence
>GWHTAAZE005309 ATGAGGAACAGCGAAAAGTGTAGTCTCTTGTCAAGTTTTGGCTTTCTGTTCTTGGCCTTTGTGATTCGTGTAATCTCAGCAGCTGACTTTGTTCCCACCGATAATATTCTACTGAATTGTGGTGGTTCCGGCGACCCTACTGATGCCGATGGCCGGAAATGGACTACTGATATTGGGTCCAAGTTTGCATTGGCTAGCGGGAAATCGCTAACATCCCCTGCTGCTACTCAGAAACCTTCAGTTCCTGATGTTCCATACTTGACTGCTCGGATTTTTCAATCCAATTTCACCTATAGTTTCCCTGTAGCATCTGGTCGCAAATTTGTCCGTTTGTACTTCTACCCTGCATCTTATTCAGGGTTGAATGCCTCAGATGCTCGCTTCTCTGTTGTCTCTGGATCATATACCCTCCTCAAGAATTTCAGTGCGGTCCAAACATCCGAGGCTCTGAACTTTGATTTTATCGTTAAGGAGTACTCTATCAATGTGCCAGCTGGAATCTTGAATGTCACCTTCATTCCAGCTTCAAATACGCCCAATTCGTACGCGTTTGTGAATGGGATTGAAGTTGTCTCGCATCCTGATATCTATAATACTGCTGATGGAACTGTCATGCTGGTTGGCCAAGCTACACCGTTGACCGTCGACAATAGGACTGCTCTTGAGAATGTTTATAGGTTAAATGTTGGTGGAAATGCCATTTCACCTTCTGGTGATACTGGCCTCTATAGATCCTGGTATGATGATTCACTTTACATATATGGGGCGGCATTTGGGGTTACGGTGGCTGCTGACCCAAACATGACAATCATGTATCCTTCGGGCATGCCAACTTATGTTGCTCCAGTTGATGTCTACAAAACTGAAAGATCGATGGGTCCGAATGTGGGCATCAACTCAAATTTCAATATGACTTGGATCTTCAACGTTGACTCGGGATTTTCTTACCTGTTTAGGCTCCATTTCTGTGAGATTACAAGTAATATTACTAAGATTAATCAGAGAGTGTTTACTATCGCCATCGGTAATCAAACTGCTGAAGGTGAAGCGGATGTGATTGCTTGGGCTGGAAGTTCTGAAGTTCCAGTGTATAAGGATTACGGGGTGCTTGTTCCTAATGGGGCTCCACAAAAGGATCTTTGGCTTTCCATGTATCCTGATACTTCCTCAACAAGCCAATACTATGATACAATCTTGAATGGTGTCGAGATATTCAAAGTAAGTGATCCTTCTGGGAATCTTGCAGGTCCAAATCCAGTACCAAATCCACAACAAGATATAATTGATCCATCATATGGTGGACCTTCATCTCGCTCGGGTAAATCGAAGAATAAGAAGGCAATAGTTGGTGGAGGTGTTGGTGGTGGCATTGCTGTACTACTACTCATTGGGCTAATAATTTGTGCTGTTTCTCGTCGACGTAGGCAGGGTAAGGATTCAAGTGCAAGCGACGGGCCATCAGGATGGCTTCCCCTTTCTTTATATGGTAATTCACACTCTTCAGGCTCTGCAAAGACAAACACTACTGGAAGCTATGCCTCCTCTCTCCCTTCGAACCTTTGTCGCCACTTTTCTTTTGCAGAGATCAAATCGGCCACCAAAAACTTCGACGAGGCTCTACTCCTCGGGGTTGGAGGATTTGGTAAGGTTTACAAGGGAGAAATCGACGGTGGAACCACGAAAGTCGCAATTAAGCGTGGAAACCCACTCTCGGAACAAGGTGTGCACGAATTCCAAACTGAAATCGAAATGCTTTCGAAACTTCGTCACCGCCACCTTGTTTCACTGATTGGTTACTGCGAAGAGAACTGTGAGATGATCCTTGTGTACGATTACATGGCCCACGGGACCCTCCGTGAGCATCTATACAAGACCCAAAAACCCCCTTTGCCATGGAAGCAGAGGCTCGAGATTTGCATAGGTGCTGCTCGTGGTTTACACTATCTCCACACCGGTGCCAAGCACACTATAATCCACCGCGATGTGAAGACAACAAACATCCTCTTGGATGAGAAGTGGGTCGCAAAGGTATCTGACTTTGGGTTGTCGAAAACGGGTCCCACATTGGATCACACTCATGTCAGCACTGTGGTTAAAGGTAGCTTTGGATATCTTGATCCAGAATACTTCAGGCGTCAACAACTGACTGAAAAATCTGATGTTTACTCATTTGGGGTTGTACTTTTCGAGATCTTGTGTGCTAGACCAGCTTTGAACCCGACACTTCCCAAGGAGCAAGTTAGCTTAGCCGAGTGGGCTTTACATTGCCAGAAGAAGGGCATTCTTGATCAGATACTCGACCCGCTTCTCAAGGGAAAGATTGCGCCTGAGTGCTTCAGAAAAGTTGCTGAGACCGCTGTTAAGTGTGTAGCGGACCAGGGGATTGAGAGGCCATCAATGGGGGATGTACTGTGGAACCTTGAGTTTGCTTTGCAGCTTCAAGAAAGTGCAGAGGAGAGTGGCAAAGGTATTGGCACCGTTGAAGAGGGTGAATTCGAAGTTTCTTGTAAGGGAAAGAAGGATCCAAACGCATCACTGGGCTTTGATGGGAATGTAACGGATTCAAGGAGCAGTGGAATGTCTATGAGCATTGGTGGTCGGAGCCTGGCAAGCGAAGACTCGGATGGGTTAACCCCCAGTGCTGTTTTCTCGCAGATTATGAACCCAAAGGGACGTTGA

Network for GWHGAAZE005303

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF12819.8	Malectin_like	38	407	1.70E-36
PF07714.18	PK_Tyr_Ser-Thr	542	804	1.10E-48

Protein Sequence

Gene family

Gene family	subfamily
Protein Kinases Family	RLK-Pelle_CrRLK1L-1

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0006468	biological_process	protein phosphorylation
GO:0004672	molecular_function	protein kinase activity
GO:0005524	molecular_function	ATP binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	128.269
	SRR3591706	second leaf	48.363
	SRR3591707	mature leaf	34.245
	SRR3591708	Shoot apex	41.570
	SRR3591709	Stem	102.118
	SRR3591710	White floral bud	96.034
	SRR3591711	White flower	82.178
	SRR3591712	Green floral bud	77.020
	SRR3591713	Yellow flower	46.024
SRP173429	SRR8316895	Juvenile bud stage	75.599
	SRR8316896	Juvenile bud stage	73.565
	SRR8316897	Juvenile bud stage	57.625
	SRR8316894	Third green stage	27.372
	SRR8316900	Third green stage	72.105
	SRR8316901	Third green stage	82.276
	SRR8316898	Complete white stage	30.142
	SRR8316899	Complete white stage	140.459
	SRR8316903	Complete white stage	58.503
	SRR8316902	Silver flowering stage	38.522
	SRR8316904	Silver flowering stage	45.952
	SRR8316905	Silver flowering stage	20.090
	SRR8316906	Gold flowering stage	51.507
	SRR8316907	Gold flowering stage	54.656
	SRR8316908	Gold flowering stage	57.937
SRP132670	SRR6706286	Control	70.628
	SRR6706287	Light intensity 50%	86.929
	SRR6706288	Light intensity 20%	93.195
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	53.950
	CNS0095593	Slightly white alabastrum(diploid) 2	70.715
	CNS0095594	Slightly white alabastrum(diploid) 3	54.451
	CNS0095595	Whole white alabastrum(diploid) 2	56.318
	CNS0095596	Whole white alabastrum(diploid) 3	29.041
	CNS0095597	Whole white alabastrum(diploid) 4	52.531
	CNS0095598	Silvery flower (diploied) 1	85.862
	CNS0095599	Silvery flower (diploied) 2	76.309
	CNS0095600	Silvery flower (diploied) 3	108.509
	CNS0095601	Golden flower (diploid) 1	74.312
	CNS0095602	Golden flower (diploid) 2	126.349
	CNS0095603	Golden flower (diploid) 3	120.734
	CNS0095604	Slightly white alabastrum(tetraploid) 1	34.982
	CNS0095605	Slightly white alabastrum(tetraploid) 2	26.671
	CNS0095606	Slightly white alabastrum(tetraploid) 3	87.793
	CNS0095607	Whole white alabastrum(tetraploid) 1	22.397
	CNS0095608	Whole white alabastrum(tetraploid) 2	20.763
	CNS0095609	Whole white alabastrum(tetraploid) 3	51.674
	CNS0095610	Silvery flower (tetraploid) 1	44.514
	CNS0095611	Silvery flower (tetraploid) 2	43.286
	CNS0095612	Silvery flower (tetraploid) 3	67.182
	CNS0095613	Golden flower (tetraploid) 1	17.061
	CNS0095614	Golden flower (tetraploid) 2	35.854
	CNS0095615	Golden flower (tetraploid) 3	33.149
CRA001975	CRR073297	Stem 1	102.553
	CRR073298	Stem 2	91.993
	CRR073299	Stem 3	100.472
	CRR073300	Leaf 1	149.027
	CRR073301	Leaf 2	155.544
	CRR073302	Leaf 3	129.824
	CRR073303	Juvenile bud 1	168.337
	CRR073304	Juvenile bud 2	144.895
	CRR073305	Juvenile bud 3	258.961
	CRR073306	Third green 1	243.776
	CRR073307	Third green 2	217.316
	CRR073308	Third green 3	241.829
	CRR073309	Second white 1	182.295
	CRR073310	Second white 2	127.772
	CRR073311	Second white 3	147.102
	CRR073312	Silver flowering 1	187.581
	CRR073313	Silver flowering 2	200.179
	CRR073314	Silver flowering 3	154.738
	CRR073315	Gold flowering 1	144.938
	CRR073316	Gold flowering 2	243.718
	CRR073317	Gold flowering 3	133.868
	CRR073318	Tawny withering 1	176.524
	CRR073319	Tawny withering 2	194.717
	CRR073320	Tawny withering 3	201.259