Detail information of GWHGAAZE005273


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_007140013.13.7778E-20hypothetical protein PHAVU_008G076900g [Phaseolus vulgaris]
Swissprottr|Q9ZVI7|GAUT7_ARATH0.0000002Probable galacturonosyltransferase 7
trEMBLtr|V7B270|V7B270_PHAVU1E-20Uncharacterized protein {ECO:0000313|EMBL:ESW12007.1}

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene52600995260715+
GWHAAZE00000002mRNA52600995260715+
GWHAAZE00000002exon52600995260252+
GWHAAZE00000002exon52606695260715+
GWHAAZE00000002CDS52600995260252+
GWHAAZE00000002CDS52606695260715+
Transcript Sequence

Network for GWHGAAZE005273

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
----------
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K13648GAUT Metabolic pathways map01100
Amino sugar and nucleotide sugar metabolismmap00520

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf37.092
SRR3591706second leaf18.798
SRR3591707mature leaf8.097
SRR3591708Shoot apex15.988
SRR3591709Stem19.652
SRR3591710White floral bud30.170
SRR3591711White flower19.291
SRR3591712Green floral bud44.168
SRR3591713Yellow flower8.076
SRP173429 SRR8316895Juvenile bud stage 15.651
SRR8316896Juvenile bud stage 19.098
SRR8316897Juvenile bud stage 10.263
SRR8316894Third green stage 12.957
SRR8316900Third green stage 38.285
SRR8316901Third green stage 33.911
SRR8316898Complete white stage 9.190
SRR8316899Complete white stage 34.414
SRR8316903Complete white stage 20.995
SRR8316902Silver flowering stage5.593
SRR8316904Silver flowering stage8.701
SRR8316905Silver flowering stage2.931
SRR8316906Gold flowering stage 10.620
SRR8316907Gold flowering stage 9.430
SRR8316908Gold flowering stage 10.666
SRP132670SRR6706286Control45.923
SRR6706287Light intensity 50%48.834
SRR6706288Light intensity 20%55.957
CNP0000432CNS0095592Slightly white alabastrum(diploid) 116.224
CNS0095593Slightly white alabastrum(diploid) 29.247
CNS0095594Slightly white alabastrum(diploid) 313.685
CNS0095595Whole white alabastrum(diploid) 216.846
CNS0095596Whole white alabastrum(diploid) 318.584
CNS0095597Whole white alabastrum(diploid) 416.850
CNS0095598Silvery flower (diploied) 17.634
CNS0095599Silvery flower (diploied) 27.481
CNS0095600Silvery flower (diploied) 317.823
CNS0095601Golden flower (diploid) 16.021
CNS0095602Golden flower (diploid) 211.837
CNS0095603Golden flower (diploid) 317.140
CNS0095604Slightly white alabastrum(tetraploid) 127.932
CNS0095605Slightly white alabastrum(tetraploid) 218.135
CNS0095606Slightly white alabastrum(tetraploid) 352.574
CNS0095607Whole white alabastrum(tetraploid) 122.159
CNS0095608Whole white alabastrum(tetraploid) 222.529
CNS0095609Whole white alabastrum(tetraploid) 349.441
CNS0095610Silvery flower (tetraploid) 117.875
CNS0095611Silvery flower (tetraploid) 210.497
CNS0095612Silvery flower (tetraploid) 318.617
CNS0095613Golden flower (tetraploid) 13.488
CNS0095614Golden flower (tetraploid) 215.083
CNS0095615Golden flower (tetraploid) 313.693
CRA001975CRR073297Stem 131.344
CRR073298Stem 232.713
CRR073299Stem 324.332
CRR073300Leaf 137.090
CRR073301Leaf 229.240
CRR073302Leaf 329.675
CRR073303Juvenile bud 124.933
CRR073304Juvenile bud 234.110
CRR073305Juvenile bud 325.700
CRR073306Third green 112.763
CRR073307Third green 28.288
CRR073308Third green 311.182
CRR073309Second white 12.112
CRR073310Second white 27.025
CRR073311Second white 35.247
CRR073312Silver flowering 15.401
CRR073313Silver flowering 22.194
CRR073314Silver flowering 32.891
CRR073315Gold flowering 12.965
CRR073316Gold flowering 24.830
CRR073317Gold flowering 35.974
CRR073318Tawny withering 19.212
CRR073319Tawny withering 26.735
CRR073320Tawny withering 35.312