Detail information of GWHGAAZE004877


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrKDO78376.10hypothetical protein CISIN_1g008424mg [Citrus sinensis]
Swissprottr|P21343|PFPB_SOLTU0Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta {ECO:0000255|HAMAP-Rule:MF_03185}
trEMBLtr|A0A067GSR5|A0A067GSR5_CITSI0Uncharacterized protein {ECO:0000313|EMBL:KDO78376.1}
TAIR10AT1G12000.16E-122Phosphofructokinase family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene123653980123666521-
GWHAAZE00000001mRNA123653980123666521-
GWHAAZE00000001exon123653980123654270-
GWHAAZE00000001exon123655636123655704-
GWHAAZE00000001exon123656112123656156-
GWHAAZE00000001exon123656371123656455-
GWHAAZE00000001exon123656831123656942-
GWHAAZE00000001exon123657194123657309-
GWHAAZE00000001exon123657403123657573-
GWHAAZE00000001exon123658387123658475-
GWHAAZE00000001exon123658850123658928-
GWHAAZE00000001exon123659265123659428-
GWHAAZE00000001exon123662377123662440-
GWHAAZE00000001exon123663060123663165-
GWHAAZE00000001exon123663388123663494-
GWHAAZE00000001exon123663636123663689-
GWHAAZE00000001exon123665541123665662-
GWHAAZE00000001exon123665754123665915-
GWHAAZE00000001exon123666359123666521-
GWHAAZE00000001CDS123666359123666521-
GWHAAZE00000001CDS123665754123665915-
GWHAAZE00000001CDS123665541123665662-
GWHAAZE00000001CDS123663636123663689-
GWHAAZE00000001CDS123663388123663494-
GWHAAZE00000001CDS123663060123663165-
GWHAAZE00000001CDS123662377123662440-
GWHAAZE00000001CDS123659265123659428-
GWHAAZE00000001CDS123658850123658928-
GWHAAZE00000001CDS123658387123658475-
GWHAAZE00000001CDS123657403123657573-
GWHAAZE00000001CDS123657194123657309-
GWHAAZE00000001CDS123656831123656942-
GWHAAZE00000001CDS123656371123656455-
GWHAAZE00000001CDS123656112123656156-
GWHAAZE00000001CDS123655636123655704-
GWHAAZE00000001CDS123654194123654270-
GWHAAZE00000001three_prime_UTR123653980123654193-
Transcript Sequence

Network for GWHGAAZE004877

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00365.21PFK872562.50E-26
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K00895pfp, PFP Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Microbial metabolism in diverse environmentsmap01120
Glycolysis / Gluconeogenesismap00010
Pentose phosphate pathwaymap00030
Fructose and mannose metabolismmap00051

Gene Ontology

GO term OntologyName
GO:0006096biological_processglycolytic process
GO:0006002biological_processfructose 6-phosphate metabolic process
GO:0003872molecular_function6-phosphofructokinase activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf23.738
SRR3591706second leaf5.455
SRR3591707mature leaf3.812
SRR3591708Shoot apex9.827
SRR3591709Stem19.264
SRR3591710White floral bud38.989
SRR3591711White flower24.221
SRR3591712Green floral bud8.231
SRR3591713Yellow flower24.075
SRP173429 SRR8316895Juvenile bud stage 10.462
SRR8316896Juvenile bud stage 16.696
SRR8316897Juvenile bud stage 6.678
SRR8316894Third green stage 7.081
SRR8316900Third green stage 10.705
SRR8316901Third green stage 12.084
SRR8316898Complete white stage 3.606
SRR8316899Complete white stage 13.585
SRR8316903Complete white stage 6.126
SRR8316902Silver flowering stage3.846
SRR8316904Silver flowering stage5.396
SRR8316905Silver flowering stage2.985
SRR8316906Gold flowering stage 2.933
SRR8316907Gold flowering stage 7.410
SRR8316908Gold flowering stage 18.361
SRP132670SRR6706286Control6.712
SRR6706287Light intensity 50%7.542
SRR6706288Light intensity 20%7.185
CNP0000432CNS0095592Slightly white alabastrum(diploid) 117.080
CNS0095593Slightly white alabastrum(diploid) 219.348
CNS0095594Slightly white alabastrum(diploid) 316.082
CNS0095595Whole white alabastrum(diploid) 212.680
CNS0095596Whole white alabastrum(diploid) 312.915
CNS0095597Whole white alabastrum(diploid) 413.040
CNS0095598Silvery flower (diploied) 112.741
CNS0095599Silvery flower (diploied) 27.439
CNS0095600Silvery flower (diploied) 33.511
CNS0095601Golden flower (diploid) 110.553
CNS0095602Golden flower (diploid) 24.320
CNS0095603Golden flower (diploid) 34.214
CNS0095604Slightly white alabastrum(tetraploid) 115.157
CNS0095605Slightly white alabastrum(tetraploid) 215.703
CNS0095606Slightly white alabastrum(tetraploid) 316.206
CNS0095607Whole white alabastrum(tetraploid) 19.267
CNS0095608Whole white alabastrum(tetraploid) 27.894
CNS0095609Whole white alabastrum(tetraploid) 39.237
CNS0095610Silvery flower (tetraploid) 18.839
CNS0095611Silvery flower (tetraploid) 26.641
CNS0095612Silvery flower (tetraploid) 312.749
CNS0095613Golden flower (tetraploid) 18.390
CNS0095614Golden flower (tetraploid) 26.906
CNS0095615Golden flower (tetraploid) 33.437
CRA001975CRR073297Stem 116.031
CRR073298Stem 215.724
CRR073299Stem 33.107
CRR073300Leaf 111.552
CRR073301Leaf 213.483
CRR073302Leaf 33.608
CRR073303Juvenile bud 12.818
CRR073304Juvenile bud 21.494
CRR073305Juvenile bud 33.031
CRR073306Third green 10.482
CRR073307Third green 20.506
CRR073308Third green 30.751
CRR073309Second white 11.213
CRR073310Second white 20.516
CRR073311Second white 30.616
CRR073312Silver flowering 10.574
CRR073313Silver flowering 20.041
CRR073314Silver flowering 30.812
CRR073315Gold flowering 12.121
CRR073316Gold flowering 24.035
CRR073317Gold flowering 30.752
CRR073318Tawny withering 14.428
CRR073319Tawny withering 26.960
CRR073320Tawny withering 34.885