Detail information of GWHGAAZE004841


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_009804773.10PREDICTED: 5'-adenylylsulfate reductase 3, chloroplastic-like [Nicotiana sylvestris]
Swissprottr|P92980|APR3_ARATH05'-adenylylsulfate reductase 3, chloroplastic (Precursor)
trEMBLtr|S5ZQS8|S5ZQS8_NICAT0APS reductase {ECO:0000313|EMBL:AGT40337.1}
TAIR10AT4G21990.10APS reductase 3

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene123209591123212070+
GWHAAZE00000001mRNA123209591123212070+
GWHAAZE00000001exon123209591123209669+
GWHAAZE00000001exon123209863123210018+
GWHAAZE00000001exon123210483123210609+
GWHAAZE00000001exon123210800123211607+
GWHAAZE00000001exon123211840123212070+
GWHAAZE00000001CDS123209591123209669+
GWHAAZE00000001CDS123209863123210018+
GWHAAZE00000001CDS123210483123210609+
GWHAAZE00000001CDS123210800123211607+
GWHAAZE00000001CDS123211840123212070+
Transcript Sequence

Network for GWHGAAZE004841

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01507.20PAPS_reduct1162961.00E-42
PF00085.21Thioredoxin3714634.50E-11
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K05907APR Metabolic pathways map01100
Microbial metabolism in diverse environmentsmap01120
Sulfur metabolismmap00920

Gene Ontology

GO term OntologyName
GO:0045454biological_processcell redox homeostasis
GO:0019419biological_processsulfate reduction
GO:0055114biological_processoxidation-reduction process
GO:0003824molecular_functioncatalytic activity
GO:0016671molecular_functionoxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf62.009
SRR3591706second leaf189.868
SRR3591707mature leaf34.859
SRR3591708Shoot apex51.803
SRR3591709Stem30.081
SRR3591710White floral bud35.008
SRR3591711White flower47.746
SRR3591712Green floral bud28.899
SRR3591713Yellow flower61.096
SRP173429 SRR8316895Juvenile bud stage 124.349
SRR8316896Juvenile bud stage 127.078
SRR8316897Juvenile bud stage 92.694
SRR8316894Third green stage 11.665
SRR8316900Third green stage 27.928
SRR8316901Third green stage 54.962
SRR8316898Complete white stage 2.862
SRR8316899Complete white stage 74.436
SRR8316903Complete white stage 5.473
SRR8316902Silver flowering stage15.103
SRR8316904Silver flowering stage22.383
SRR8316905Silver flowering stage17.437
SRR8316906Gold flowering stage 57.452
SRR8316907Gold flowering stage 44.500
SRR8316908Gold flowering stage 54.011
SRP132670SRR6706286Control26.984
SRR6706287Light intensity 50%21.502
SRR6706288Light intensity 20%20.143
CNP0000432CNS0095592Slightly white alabastrum(diploid) 187.312
CNS0095593Slightly white alabastrum(diploid) 2177.696
CNS0095594Slightly white alabastrum(diploid) 3164.532
CNS0095595Whole white alabastrum(diploid) 2171.049
CNS0095596Whole white alabastrum(diploid) 329.122
CNS0095597Whole white alabastrum(diploid) 494.769
CNS0095598Silvery flower (diploied) 1207.679
CNS0095599Silvery flower (diploied) 2304.022
CNS0095600Silvery flower (diploied) 3140.786
CNS0095601Golden flower (diploid) 1266.243
CNS0095602Golden flower (diploid) 2182.726
CNS0095603Golden flower (diploid) 3184.932
CNS0095604Slightly white alabastrum(tetraploid) 128.912
CNS0095605Slightly white alabastrum(tetraploid) 233.731
CNS0095606Slightly white alabastrum(tetraploid) 395.400
CNS0095607Whole white alabastrum(tetraploid) 123.775
CNS0095608Whole white alabastrum(tetraploid) 216.486
CNS0095609Whole white alabastrum(tetraploid) 330.383
CNS0095610Silvery flower (tetraploid) 148.517
CNS0095611Silvery flower (tetraploid) 241.969
CNS0095612Silvery flower (tetraploid) 358.085
CNS0095613Golden flower (tetraploid) 134.668
CNS0095614Golden flower (tetraploid) 244.847
CNS0095615Golden flower (tetraploid) 344.928
CRA001975CRR073297Stem 119.097
CRR073298Stem 223.585
CRR073299Stem 326.100
CRR073300Leaf 147.286
CRR073301Leaf 262.522
CRR073302Leaf 320.690
CRR073303Juvenile bud 134.419
CRR073304Juvenile bud 224.364
CRR073305Juvenile bud 382.606
CRR073306Third green 122.830
CRR073307Third green 229.671
CRR073308Third green 314.492
CRR073309Second white 180.222
CRR073310Second white 280.863
CRR073311Second white 3114.281
CRR073312Silver flowering 1145.326
CRR073313Silver flowering 2147.651
CRR073314Silver flowering 3125.502
CRR073315Gold flowering 148.897
CRR073316Gold flowering 266.334
CRR073317Gold flowering 352.502
CRR073318Tawny withering 127.422
CRR073319Tawny withering 271.088
CRR073320Tawny withering 318.903