Detail information of GWHGAAZE004725


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrKDO75758.10hypothetical protein CISIN_1g002489mg [Citrus sinensis]
Swissprottr|Q0D5G4|Y7633_ORYSJ4E-175B3 domain-containing protein Os07g0563300
trEMBLtr|A0A067G7Z1|A0A067G7Z1_CITSI0Uncharacterized protein {ECO:0000313|EMBL:KDO75758.1}
TAIR10AT4G32010.12E-107HSI2-like 1

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene121231591121236825-
GWHAAZE00000001mRNA121231591121236825-
GWHAAZE00000001exon121236763121236825-
GWHAAZE00000001exon121235976121236150-
GWHAAZE00000001exon121235831121235863-
GWHAAZE00000001exon121235109121235185-
GWHAAZE00000001exon121234540121234947-
GWHAAZE00000001exon121234066121234115-
GWHAAZE00000001exon121233435121233548-
GWHAAZE00000001exon121232639121232709-
GWHAAZE00000001exon121231591121232494-
GWHAAZE00000001CDS121236763121236825-
GWHAAZE00000001CDS121235976121236150-
GWHAAZE00000001CDS121235831121235863-
GWHAAZE00000001CDS121235109121235185-
GWHAAZE00000001CDS121234540121234947-
GWHAAZE00000001CDS121234066121234115-
GWHAAZE00000001CDS121233435121233548-
GWHAAZE00000001CDS121232639121232709-
GWHAAZE00000001CDS121231791121232494-
GWHAAZE00000001three_prime_UTR121231591121231790-
Transcript Sequence

Network for GWHGAAZE004725

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02362.22B32791.50E-10
PF07496.16zf-CW2733151.40E-10
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyB3

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0008270molecular_functionzinc ion binding
GO:0003677molecular_functionDNA binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf26.541
SRR3591706second leaf14.345
SRR3591707mature leaf26.660
SRR3591708Shoot apex22.607
SRR3591709Stem41.503
SRR3591710White floral bud24.473
SRR3591711White flower31.697
SRR3591712Green floral bud23.343
SRR3591713Yellow flower19.928
SRP173429 SRR8316895Juvenile bud stage 19.137
SRR8316896Juvenile bud stage 18.767
SRR8316897Juvenile bud stage 13.110
SRR8316894Third green stage 8.721
SRR8316900Third green stage 20.272
SRR8316901Third green stage 19.717
SRR8316898Complete white stage 6.947
SRR8316899Complete white stage 32.758
SRR8316903Complete white stage 13.712
SRR8316902Silver flowering stage9.074
SRR8316904Silver flowering stage14.185
SRR8316905Silver flowering stage6.761
SRR8316906Gold flowering stage 18.217
SRR8316907Gold flowering stage 18.825
SRR8316908Gold flowering stage 19.624
SRP132670SRR6706286Control11.318
SRR6706287Light intensity 50%14.020
SRR6706288Light intensity 20%13.976
CNP0000432CNS0095592Slightly white alabastrum(diploid) 121.909
CNS0095593Slightly white alabastrum(diploid) 219.630
CNS0095594Slightly white alabastrum(diploid) 318.224
CNS0095595Whole white alabastrum(diploid) 217.461
CNS0095596Whole white alabastrum(diploid) 310.935
CNS0095597Whole white alabastrum(diploid) 416.179
CNS0095598Silvery flower (diploied) 130.761
CNS0095599Silvery flower (diploied) 218.152
CNS0095600Silvery flower (diploied) 321.142
CNS0095601Golden flower (diploid) 125.621
CNS0095602Golden flower (diploid) 227.950
CNS0095603Golden flower (diploid) 326.185
CNS0095604Slightly white alabastrum(tetraploid) 120.055
CNS0095605Slightly white alabastrum(tetraploid) 217.031
CNS0095606Slightly white alabastrum(tetraploid) 331.884
CNS0095607Whole white alabastrum(tetraploid) 113.088
CNS0095608Whole white alabastrum(tetraploid) 211.031
CNS0095609Whole white alabastrum(tetraploid) 314.915
CNS0095610Silvery flower (tetraploid) 125.266
CNS0095611Silvery flower (tetraploid) 227.262
CNS0095612Silvery flower (tetraploid) 321.453
CNS0095613Golden flower (tetraploid) 119.746
CNS0095614Golden flower (tetraploid) 223.074
CNS0095615Golden flower (tetraploid) 320.857
CRA001975CRR073297Stem 128.626
CRR073298Stem 223.605
CRR073299Stem 311.693
CRR073300Leaf 122.494
CRR073301Leaf 223.003
CRR073302Leaf 37.511
CRR073303Juvenile bud 110.167
CRR073304Juvenile bud 25.892
CRR073305Juvenile bud 317.695
CRR073306Third green 14.100
CRR073307Third green 23.553
CRR073308Third green 35.708
CRR073309Second white 16.726
CRR073310Second white 25.025
CRR073311Second white 38.671
CRR073312Silver flowering 14.158
CRR073313Silver flowering 24.035
CRR073314Silver flowering 34.050
CRR073315Gold flowering 110.727
CRR073316Gold flowering 218.899
CRR073317Gold flowering 38.139
CRR073318Tawny withering 117.033
CRR073319Tawny withering 225.444
CRR073320Tawny withering 317.038