Detail information of GWHGAAZE004647


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrKHG07930.11.4772E-85dehydration-induced 19 [Gossypium arboreum]
Swissprottr|Q688X9|DI191_ORYSJ5E-51Protein DEHYDRATION-INDUCED 19
trEMBLtr|A0A061GEB0|A0A061GEB0_THECC2E-84Drought-responsive family protein {ECO:0000313|EMBL:EOY28175.1}
TAIR10AT3G05700.11E-10Drought-responsive family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene120172045120174472+
GWHAAZE00000001mRNA120172045120174472+
GWHAAZE00000001exon120172045120172135+
GWHAAZE00000001exon120172231120172370+
GWHAAZE00000001exon120174161120174472+
GWHAAZE00000001CDS120172045120172135+
GWHAAZE00000001CDS120172231120172370+
GWHAAZE00000001CDS120174161120174472+
Transcript Sequence

Network for GWHGAAZE004647

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF05605.13zf-Di1947746.30E-08
PF14571.7Di19_C971752.00E-18
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyC2H2

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf57.128
SRR3591706second leaf47.399
SRR3591707mature leaf80.368
SRR3591708Shoot apex65.335
SRR3591709Stem68.840
SRR3591710White floral bud78.748
SRR3591711White flower74.709
SRR3591712Green floral bud86.364
SRR3591713Yellow flower105.963
SRP173429 SRR8316895Juvenile bud stage 13.820
SRR8316896Juvenile bud stage 27.330
SRR8316897Juvenile bud stage 11.735
SRR8316894Third green stage 12.793
SRR8316900Third green stage 45.521
SRR8316901Third green stage 36.079
SRR8316898Complete white stage 9.316
SRR8316899Complete white stage 34.627
SRR8316903Complete white stage 12.669
SRR8316902Silver flowering stage9.452
SRR8316904Silver flowering stage13.996
SRR8316905Silver flowering stage6.635
SRR8316906Gold flowering stage 27.463
SRR8316907Gold flowering stage 29.790
SRR8316908Gold flowering stage 32.854
SRP132670SRR6706286Control52.076
SRR6706287Light intensity 50%46.504
SRR6706288Light intensity 20%51.180
CNP0000432CNS0095592Slightly white alabastrum(diploid) 125.625
CNS0095593Slightly white alabastrum(diploid) 220.212
CNS0095594Slightly white alabastrum(diploid) 322.509
CNS0095595Whole white alabastrum(diploid) 223.138
CNS0095596Whole white alabastrum(diploid) 330.838
CNS0095597Whole white alabastrum(diploid) 430.464
CNS0095598Silvery flower (diploied) 120.217
CNS0095599Silvery flower (diploied) 214.825
CNS0095600Silvery flower (diploied) 323.808
CNS0095601Golden flower (diploid) 117.646
CNS0095602Golden flower (diploid) 231.182
CNS0095603Golden flower (diploid) 326.217
CNS0095604Slightly white alabastrum(tetraploid) 129.728
CNS0095605Slightly white alabastrum(tetraploid) 224.156
CNS0095606Slightly white alabastrum(tetraploid) 320.638
CNS0095607Whole white alabastrum(tetraploid) 131.629
CNS0095608Whole white alabastrum(tetraploid) 233.835
CNS0095609Whole white alabastrum(tetraploid) 340.990
CNS0095610Silvery flower (tetraploid) 118.851
CNS0095611Silvery flower (tetraploid) 217.180
CNS0095612Silvery flower (tetraploid) 37.518
CNS0095613Golden flower (tetraploid) 126.721
CNS0095614Golden flower (tetraploid) 225.259
CNS0095615Golden flower (tetraploid) 321.304
CRA001975CRR073297Stem 131.379
CRR073298Stem 232.235
CRR073299Stem 336.875
CRR073300Leaf 135.953
CRR073301Leaf 237.924
CRR073302Leaf 336.536
CRR073303Juvenile bud 142.087
CRR073304Juvenile bud 239.229
CRR073305Juvenile bud 328.903
CRR073306Third green 117.640
CRR073307Third green 217.383
CRR073308Third green 312.696
CRR073309Second white 19.997
CRR073310Second white 214.592
CRR073311Second white 310.554
CRR073312Silver flowering 123.761
CRR073313Silver flowering 224.485
CRR073314Silver flowering 321.253
CRR073315Gold flowering 111.193
CRR073316Gold flowering 218.515
CRR073317Gold flowering 37.637
CRR073318Tawny withering 126.246
CRR073319Tawny withering 227.092
CRR073320Tawny withering 326.629