Detail information of GWHGAAZE004524


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrABA81886.15.7101E-103unknown [Solanum tuberosum]
COGNP_926658.16E-13glucosyltransferase EpsE-like protein
trEMBLtr|Q38M46|Q38M46_SOLTU2E-103Putative uncharacterized protein {ECO:0000313|EMBL:ABA81886.1}
TAIR10AT4G18230.12E-70Without detailed annotation

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene118381718118383027-
GWHAAZE00000001mRNA118381718118383027-
GWHAAZE00000001exon118382844118383027-
GWHAAZE00000001exon118382657118382748-
GWHAAZE00000001exon118382113118382262-
GWHAAZE00000001exon118381970118382029-
GWHAAZE00000001exon118381718118381894-
GWHAAZE00000001CDS118382844118383027-
GWHAAZE00000001CDS118382657118382748-
GWHAAZE00000001CDS118382113118382262-
GWHAAZE00000001CDS118381970118382029-
GWHAAZE00000001CDS118381718118381894-
Transcript Sequence

Network for GWHGAAZE004524

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF08660.12Alg14432191.50E-52
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K07441ALG14 Metabolic pathways map01100
N-Glycan biosynthesismap00510
Various types of N-glycan biosynthesismap00513

Gene Ontology

GO term OntologyName
GO:0006488biological_processdolichol-linked oligosaccharide biosynthetic process

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf22.819
SRR3591706second leaf11.348
SRR3591707mature leaf16.906
SRR3591708Shoot apex17.087
SRR3591709Stem28.194
SRR3591710White floral bud17.446
SRR3591711White flower23.890
SRR3591712Green floral bud18.206
SRR3591713Yellow flower20.727
SRP173429 SRR8316895Juvenile bud stage 15.534
SRR8316896Juvenile bud stage 16.391
SRR8316897Juvenile bud stage 10.600
SRR8316894Third green stage 6.462
SRR8316900Third green stage 21.753
SRR8316901Third green stage 18.674
SRR8316898Complete white stage 8.269
SRR8316899Complete white stage 29.032
SRR8316903Complete white stage 16.266
SRR8316902Silver flowering stage11.058
SRR8316904Silver flowering stage12.340
SRR8316905Silver flowering stage6.814
SRR8316906Gold flowering stage 22.917
SRR8316907Gold flowering stage 18.005
SRR8316908Gold flowering stage 23.260
SRP132670SRR6706286Control18.991
SRR6706287Light intensity 50%18.171
SRR6706288Light intensity 20%15.756
CNP0000432CNS0095592Slightly white alabastrum(diploid) 114.439
CNS0095593Slightly white alabastrum(diploid) 215.446
CNS0095594Slightly white alabastrum(diploid) 316.018
CNS0095595Whole white alabastrum(diploid) 211.294
CNS0095596Whole white alabastrum(diploid) 315.269
CNS0095597Whole white alabastrum(diploid) 414.622
CNS0095598Silvery flower (diploied) 121.109
CNS0095599Silvery flower (diploied) 222.361
CNS0095600Silvery flower (diploied) 329.657
CNS0095601Golden flower (diploid) 123.462
CNS0095602Golden flower (diploid) 237.972
CNS0095603Golden flower (diploid) 334.126
CNS0095604Slightly white alabastrum(tetraploid) 119.093
CNS0095605Slightly white alabastrum(tetraploid) 214.829
CNS0095606Slightly white alabastrum(tetraploid) 320.919
CNS0095607Whole white alabastrum(tetraploid) 113.735
CNS0095608Whole white alabastrum(tetraploid) 214.596
CNS0095609Whole white alabastrum(tetraploid) 318.389
CNS0095610Silvery flower (tetraploid) 122.946
CNS0095611Silvery flower (tetraploid) 226.677
CNS0095612Silvery flower (tetraploid) 321.203
CNS0095613Golden flower (tetraploid) 117.962
CNS0095614Golden flower (tetraploid) 220.254
CNS0095615Golden flower (tetraploid) 328.889
CRA001975CRR073297Stem 117.359
CRR073298Stem 214.676
CRR073299Stem 312.929
CRR073300Leaf 118.232
CRR073301Leaf 215.293
CRR073302Leaf 314.336
CRR073303Juvenile bud 117.122
CRR073304Juvenile bud 216.225
CRR073305Juvenile bud 321.097
CRR073306Third green 18.447
CRR073307Third green 29.232
CRR073308Third green 38.355
CRR073309Second white 120.587
CRR073310Second white 211.791
CRR073311Second white 311.144
CRR073312Silver flowering 115.464
CRR073313Silver flowering 214.303
CRR073314Silver flowering 311.079
CRR073315Gold flowering 111.272
CRR073316Gold flowering 212.275
CRR073317Gold flowering 316.463
CRR073318Tawny withering 120.557
CRR073319Tawny withering 223.909
CRR073320Tawny withering 319.256