Gene detail

Detail information of GWHGAAZE004351

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_011085174.1	0	PREDICTED: beta-amyrin 28-oxidase-like [Sesamum indicum]
COG	YP_007117231.1	2E-70	(+)-abscisic acid 8'-hydroxylase
Swissprot	tr\|I7C6E8\|C7A52_PANGI	2E-162	Beta-amyrin 28-oxidase
trEMBL	tr\|A0A068TQR9\|A0A068TQR9_COFCA	0	Coffea canephora DH200=94 genomic scaffold, scaffold_2 {ECO:0000313\|EMBL:CDO98601.1}
TAIR10	AT5G36110.1	3E-113	cytochrome P450, family 716, subfamily A, polypeptide 1

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000001	gene	115645039	115647714	+
GWHAAZE00000001	mRNA	115645039	115647714	+
GWHAAZE00000001	exon	115645039	115645643	+
GWHAAZE00000001	exon	115646640	115646989	+
GWHAAZE00000001	exon	115647076	115647263	+
GWHAAZE00000001	exon	115647418	115647714	+
GWHAAZE00000001	CDS	115645039	115645643	+
GWHAAZE00000001	CDS	115646640	115646989	+
GWHAAZE00000001	CDS	115647076	115647263	+
GWHAAZE00000001	CDS	115647418	115647714	+

Transcript Sequence
>GWHTAAZE004357 ATGGAGTTCTTTATTTTGTCAATCTTTCTCTCTCTTATCATTCTCTCTCTAACACTCGCTATTCTTATTTTCGGACGGCCGGGTGATACCGATCCCAAGCTGCCGCCGGGCAGTTTGGGCTGGCCCGTTATGGGCGAAACAATCGAATTCCTGTTTGGTACGCCGGAAAAATTCGTGGGTGACAGAATGGAAAAATACTCTCCCGATATATTTAAAACAAACATTCTTGGAGAAAAAACCGCGGTAATATGTGGGCCCAACGGGCACAAATTTCTCTTCTCTAATGAGCAGAAATATTTCACCGTCTTCCGTCCCCACCCAATGCAAAGACTCTTCCGGTCGTACAAAACTGCTACTTCCGCAGCTCCATCGCCAGCGGCGGCAGTAGCGGTCGACGAGTCGAAAGCAATTCGTCAACCCGGGTTTTTGAAACCCGAGGCACTGGCCCGGTTCCTAGGAGGAATGGATACAATTACCCAACAACAATTGAAATTGCATTGGGAGGGCAAAGATGAAGTGAAAGCATTTCCTTTGTCGAAGTGCGTGACTCTGACGCTCGCGTGCAGATTCTTTATGGGAATTGATAATCCAGAGAGAATTGCCAGGTTGGTGGGTCATTTCGATGATATTACTTTAGGGATGCATTCAATTATTTCGATTGTGCCTGGTACAATTTTTTACCGTGCGAATAAAGCGGCAGCTGCAATTAGGAAAGAGTTATTGAAGGTGATCAAGGAGAAGAAGGCAGATATGGCTGCGGGAAAGCCGATGCAAGATATACTGTCGCATATGATTGTGGTGGCGGACCCGAGCGGGCGGTTCATGCCGGAGGTGGAGATTGCCGATAAGATTATGGGATTGTTGGTCGCCGGGTACAGTACCGTCGCTACTACTATTGCTTTTCTTATGAAGTATGTTGGGGAAGATGCTGAAATTTATGAGAAGATTAGATCAGAGCAAATGAAAATTGTGGAGTCGAAGAAGCCGGGAGAATTATTAGACTGGGAGGACGTGAACAAAATGAGGTACTCATGGAACGTTATATGCGAAACGATGAGACTTGTTCCACCACTTCAAGGGACTTTCCGAGAGGCATTAACCGAATTCACTTATGCTGGTTACACTGTTCCAAAGGGGTGGAAGGTATATTGGACTGTTAGTACAACTAACATGAATCCTAAATACTTTAAGAACCCCCAAAAATTCAACCCATCAAGATACGACGAAGGAGAAGCACCGCCTCCTTATACGTACGTTCCATTTGGAGGCGGGCCAAGAATGTGCCCCGGGAAAGAGTATGCTCGGTTGGCTATTCTCAGCTTTGTCCATAATGTTGTGAAGAAATATAAGTGGGAGGTACTATTTCCCGATGAGAAAATTACTGGTGATATGATGCCAACACCCGAGAAAGGTCTTCCGATCCGTCTACATAGTCAGTAG

Network for GWHGAAZE004351

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00067.23	p450	35	454	1.50E-53

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0055114	biological_process	oxidation-reduction process
GO:0005506	molecular_function	iron ion binding
GO:0016705	molecular_function	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037	molecular_function	heme binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	3.544
	SRR3591706	second leaf	0.138
	SRR3591707	mature leaf	0.000
	SRR3591708	Shoot apex	0.962
	SRR3591709	Stem	4.877
	SRR3591710	White floral bud	0.209
	SRR3591711	White flower	0.563
	SRR3591712	Green floral bud	0.582
	SRR3591713	Yellow flower	1.106
SRP173429	SRR8316895	Juvenile bud stage	0.454
	SRR8316896	Juvenile bud stage	1.064
	SRR8316897	Juvenile bud stage	0.844
	SRR8316894	Third green stage	0.234
	SRR8316900	Third green stage	0.572
	SRR8316901	Third green stage	0.356
	SRR8316898	Complete white stage	1.848
	SRR8316899	Complete white stage	1.074
	SRR8316903	Complete white stage	0.793
	SRR8316902	Silver flowering stage	0.105
	SRR8316904	Silver flowering stage	0.756
	SRR8316905	Silver flowering stage	0.139
	SRR8316906	Gold flowering stage	1.474
	SRR8316907	Gold flowering stage	0.300
	SRR8316908	Gold flowering stage	4.761
SRP132670	SRR6706286	Control	1.050
	SRR6706287	Light intensity 50%	0.417
	SRR6706288	Light intensity 20%	0.196
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	0.628
	CNS0095593	Slightly white alabastrum(diploid) 2	0.343
	CNS0095594	Slightly white alabastrum(diploid) 3	0.559
	CNS0095595	Whole white alabastrum(diploid) 2	0.439
	CNS0095596	Whole white alabastrum(diploid) 3	0.489
	CNS0095597	Whole white alabastrum(diploid) 4	0.680
	CNS0095598	Silvery flower (diploied) 1	0.817
	CNS0095599	Silvery flower (diploied) 2	0.962
	CNS0095600	Silvery flower (diploied) 3	0.517
	CNS0095601	Golden flower (diploid) 1	0.324
	CNS0095602	Golden flower (diploid) 2	1.194
	CNS0095603	Golden flower (diploid) 3	1.361
	CNS0095604	Slightly white alabastrum(tetraploid) 1	2.734
	CNS0095605	Slightly white alabastrum(tetraploid) 2	1.749
	CNS0095606	Slightly white alabastrum(tetraploid) 3	2.879
	CNS0095607	Whole white alabastrum(tetraploid) 1	1.169
	CNS0095608	Whole white alabastrum(tetraploid) 2	2.908
	CNS0095609	Whole white alabastrum(tetraploid) 3	1.301
	CNS0095610	Silvery flower (tetraploid) 1	0.712
	CNS0095611	Silvery flower (tetraploid) 2	0.523
	CNS0095612	Silvery flower (tetraploid) 3	1.263
	CNS0095613	Golden flower (tetraploid) 1	1.291
	CNS0095614	Golden flower (tetraploid) 2	1.198
	CNS0095615	Golden flower (tetraploid) 3	0.136
CRA001975	CRR073297	Stem 1	1.049
	CRR073298	Stem 2	1.335
	CRR073299	Stem 3	1.215
	CRR073300	Leaf 1	1.552
	CRR073301	Leaf 2	1.274
	CRR073302	Leaf 3	0.303
	CRR073303	Juvenile bud 1	0.190
	CRR073304	Juvenile bud 2	0.110
	CRR073305	Juvenile bud 3	1.413
	CRR073306	Third green 1	0.275
	CRR073307	Third green 2	0.642
	CRR073308	Third green 3	0.561
	CRR073309	Second white 1	0.679
	CRR073310	Second white 2	0.535
	CRR073311	Second white 3	0.328
	CRR073312	Silver flowering 1	0.433
	CRR073313	Silver flowering 2	1.488
	CRR073314	Silver flowering 3	0.151
	CRR073315	Gold flowering 1	0.000
	CRR073316	Gold flowering 2	0.000
	CRR073317	Gold flowering 3	0.402
	CRR073318	Tawny withering 1	15.440
	CRR073319	Tawny withering 2	27.394
	CRR073320	Tawny withering 3	1.057