Detail information of GWHGAAZE004117


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002275980.10PREDICTED: regulatory protein NPR5 [Vitis vinifera]
Swissprottr|Q9ZVC2|NPR5_ARATH0Regulatory protein NPR5
trEMBLtr|F6HLP4|F6HLP4_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CCB55300.1}
TAIR10AT2G41370.17E-139Ankyrin repeat family protein / BTB/POZ domain-containing protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene111518754111521451-
GWHAAZE00000001mRNA111518754111521451-
GWHAAZE00000001exon111520981111521451-
GWHAAZE00000001exon111519678111519719-
GWHAAZE00000001exon111519206111519550-
GWHAAZE00000001exon111518754111519128-
GWHAAZE00000001five_prime_UTR111521443111521451-
GWHAAZE00000001CDS111520981111521442-
GWHAAZE00000001CDS111519678111519719-
GWHAAZE00000001CDS111519206111519550-
GWHAAZE00000001CDS111518754111519128-
Transcript Sequence

Network for GWHGAAZE004117

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00651.32BTB161091.10E-14
PF12796.8Ank_22152771.30E-06
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyTRAF

KEGG pathway

KO Enzyme pathway mapID
K14508NPR1 Plant hormone signal transduction map04075

Gene Ontology

GO term OntologyName
GO:0005515molecular_functionprotein binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf2.645
SRR3591706second leaf0.128
SRR3591707mature leaf0.211
SRR3591708Shoot apex3.565
SRR3591709Stem4.029
SRR3591710White floral bud3.856
SRR3591711White flower8.957
SRR3591712Green floral bud1.044
SRR3591713Yellow flower3.162
SRP173429 SRR8316895Juvenile bud stage 0.612
SRR8316896Juvenile bud stage 0.626
SRR8316897Juvenile bud stage 0.477
SRR8316894Third green stage 0.278
SRR8316900Third green stage 0.409
SRR8316901Third green stage 0.173
SRR8316898Complete white stage 0.544
SRR8316899Complete white stage 1.038
SRR8316903Complete white stage 1.032
SRR8316902Silver flowering stage0.893
SRR8316904Silver flowering stage1.230
SRR8316905Silver flowering stage0.403
SRR8316906Gold flowering stage 1.226
SRR8316907Gold flowering stage 2.325
SRR8316908Gold flowering stage 1.322
SRP132670SRR6706286Control0.641
SRR6706287Light intensity 50%0.600
SRR6706288Light intensity 20%0.623
CNP0000432CNS0095592Slightly white alabastrum(diploid) 10.505
CNS0095593Slightly white alabastrum(diploid) 20.569
CNS0095594Slightly white alabastrum(diploid) 30.116
CNS0095595Whole white alabastrum(diploid) 20.283
CNS0095596Whole white alabastrum(diploid) 30.017
CNS0095597Whole white alabastrum(diploid) 40.391
CNS0095598Silvery flower (diploied) 13.228
CNS0095599Silvery flower (diploied) 21.523
CNS0095600Silvery flower (diploied) 32.199
CNS0095601Golden flower (diploid) 10.793
CNS0095602Golden flower (diploid) 22.159
CNS0095603Golden flower (diploid) 32.327
CNS0095604Slightly white alabastrum(tetraploid) 11.146
CNS0095605Slightly white alabastrum(tetraploid) 21.073
CNS0095606Slightly white alabastrum(tetraploid) 33.987
CNS0095607Whole white alabastrum(tetraploid) 10.772
CNS0095608Whole white alabastrum(tetraploid) 20.567
CNS0095609Whole white alabastrum(tetraploid) 30.000
CNS0095610Silvery flower (tetraploid) 14.085
CNS0095611Silvery flower (tetraploid) 24.460
CNS0095612Silvery flower (tetraploid) 33.464
CNS0095613Golden flower (tetraploid) 12.983
CNS0095614Golden flower (tetraploid) 24.925
CNS0095615Golden flower (tetraploid) 33.743
CRA001975CRR073297Stem 10.819
CRR073298Stem 21.122
CRR073299Stem 32.123
CRR073300Leaf 10.329
CRR073301Leaf 20.792
CRR073302Leaf 30.236
CRR073303Juvenile bud 10.809
CRR073304Juvenile bud 20.248
CRR073305Juvenile bud 30.582
CRR073306Third green 10.902
CRR073307Third green 21.278
CRR073308Third green 31.855
CRR073309Second white 10.775
CRR073310Second white 21.058
CRR073311Second white 30.838
CRR073312Silver flowering 11.050
CRR073313Silver flowering 21.083
CRR073314Silver flowering 31.080
CRR073315Gold flowering 10.036
CRR073316Gold flowering 20.102
CRR073317Gold flowering 30.150
CRR073318Tawny withering 17.808
CRR073319Tawny withering 22.508
CRR073320Tawny withering 36.397