Detail information of GWHGAAZE003927


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrKDO52444.13.44463E-31hypothetical protein CISIN_1g010060mg [Citrus sinensis]
trEMBLtr|A0A067EB65|A0A067EB65_CITSI1E-31Uncharacterized protein {ECO:0000313|EMBL:KDO52444.1}
TAIR10AT1G06720.17E-25P-loop containing nucleoside triphosphate hydrolases superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene107177457107177809-
GWHAAZE00000001mRNA107177457107177809-
GWHAAZE00000001exon107177457107177681-
GWHAAZE00000001exon107177801107177809-
GWHAAZE00000001CDS107177801107177809-
GWHAAZE00000001CDS107177457107177681-
Transcript Sequence

Network for GWHGAAZE003927

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K14569BMS1 Ribosome biogenesis in eukaryotes map03008

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf15.326
SRR3591706second leaf8.707
SRR3591707mature leaf7.149
SRR3591708Shoot apex9.699
SRR3591709Stem9.932
SRR3591710White floral bud9.004
SRR3591711White flower10.492
SRR3591712Green floral bud12.486
SRR3591713Yellow flower7.376
SRP173429 SRR8316895Juvenile bud stage 7.740
SRR8316896Juvenile bud stage 10.396
SRR8316897Juvenile bud stage 5.205
SRR8316894Third green stage 6.587
SRR8316900Third green stage 9.913
SRR8316901Third green stage 8.776
SRR8316898Complete white stage 4.478
SRR8316899Complete white stage 12.417
SRR8316903Complete white stage 9.258
SRR8316902Silver flowering stage4.977
SRR8316904Silver flowering stage6.888
SRR8316905Silver flowering stage1.980
SRR8316906Gold flowering stage 9.045
SRR8316907Gold flowering stage 8.091
SRR8316908Gold flowering stage 9.718
SRP132670SRR6706286Control2.383
SRR6706287Light intensity 50%3.764
SRR6706288Light intensity 20%4.212
CNP0000432CNS0095592Slightly white alabastrum(diploid) 15.721
CNS0095593Slightly white alabastrum(diploid) 23.662
CNS0095594Slightly white alabastrum(diploid) 31.327
CNS0095595Whole white alabastrum(diploid) 24.571
CNS0095596Whole white alabastrum(diploid) 33.618
CNS0095597Whole white alabastrum(diploid) 44.081
CNS0095598Silvery flower (diploied) 112.703
CNS0095599Silvery flower (diploied) 22.940
CNS0095600Silvery flower (diploied) 312.448
CNS0095601Golden flower (diploid) 15.212
CNS0095602Golden flower (diploid) 212.417
CNS0095603Golden flower (diploid) 310.882
CNS0095604Slightly white alabastrum(tetraploid) 17.647
CNS0095605Slightly white alabastrum(tetraploid) 22.874
CNS0095606Slightly white alabastrum(tetraploid) 314.856
CNS0095607Whole white alabastrum(tetraploid) 11.992
CNS0095608Whole white alabastrum(tetraploid) 23.136
CNS0095609Whole white alabastrum(tetraploid) 39.401
CNS0095610Silvery flower (tetraploid) 111.259
CNS0095611Silvery flower (tetraploid) 211.731
CNS0095612Silvery flower (tetraploid) 310.227
CNS0095613Golden flower (tetraploid) 12.840
CNS0095614Golden flower (tetraploid) 211.620
CNS0095615Golden flower (tetraploid) 36.846
CRA001975CRR073297Stem 18.677
CRR073298Stem 211.572
CRR073299Stem 33.709
CRR073300Leaf 16.568
CRR073301Leaf 24.786
CRR073302Leaf 32.427
CRR073303Juvenile bud 14.900
CRR073304Juvenile bud 21.033
CRR073305Juvenile bud 39.355
CRR073306Third green 10.680
CRR073307Third green 21.134
CRR073308Third green 30.808
CRR073309Second white 11.293
CRR073310Second white 22.063
CRR073311Second white 30.969
CRR073312Silver flowering 10.521
CRR073313Silver flowering 20.517
CRR073314Silver flowering 31.576
CRR073315Gold flowering 11.647
CRR073316Gold flowering 23.796
CRR073317Gold flowering 33.757
CRR073318Tawny withering 11.476
CRR073319Tawny withering 21.035
CRR073320Tawny withering 31.915