Detail information of GWHGAAZE003866


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_011094185.10PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 isoform X3 [Sesamum indicum]
Swissprottr|Q9FPT1|UBP12_ARATH0Ubiquitin carboxyl-terminal hydrolase 12
trEMBLtr|D7U8M2|D7U8M2_VITVI0Ubiquitin carboxyl-terminal hydrolase {ECO:0000256|RuleBase:RU004435}
TAIR10AT5G06600.10ubiquitin-specific protease 12

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene106020090106046580-
GWHAAZE00000001mRNA106020090106046580-
GWHAAZE00000001exon106046411106046580-
GWHAAZE00000001exon106046146106046303-
GWHAAZE00000001exon106043528106043793-
GWHAAZE00000001exon106043205106043423-
GWHAAZE00000001exon106043025106043133-
GWHAAZE00000001exon106042626106042741-
GWHAAZE00000001exon106040581106040679-
GWHAAZE00000001exon106038711106038820-
GWHAAZE00000001exon106037399106037473-
GWHAAZE00000001exon106034229106034307-
GWHAAZE00000001exon106033979106034125-
GWHAAZE00000001exon106033481106033561-
GWHAAZE00000001exon106033274106033393-
GWHAAZE00000001exon106031848106031970-
GWHAAZE00000001exon106030982106031059-
GWHAAZE00000001exon106030772106030860-
GWHAAZE00000001exon106028662106028770-
GWHAAZE00000001exon106028462106028530-
GWHAAZE00000001exon106028270106028380-
GWHAAZE00000001exon106024652106024707-
GWHAAZE00000001exon106024386106024563-
GWHAAZE00000001exon106024178106024279-
GWHAAZE00000001exon106024028106024099-
GWHAAZE00000001exon106023185106023262-
GWHAAZE00000001exon106021544106021626-
GWHAAZE00000001exon106020944106020998-
GWHAAZE00000001exon106020715106020789-
GWHAAZE00000001exon106020293106020379-
GWHAAZE00000001exon106020090106020131-
GWHAAZE00000001CDS106046411106046580-
GWHAAZE00000001CDS106046146106046303-
GWHAAZE00000001CDS106043528106043793-
GWHAAZE00000001CDS106043205106043423-
GWHAAZE00000001CDS106043025106043133-
GWHAAZE00000001CDS106042626106042741-
GWHAAZE00000001CDS106040581106040679-
GWHAAZE00000001CDS106038711106038820-
GWHAAZE00000001CDS106037399106037473-
GWHAAZE00000001CDS106034229106034307-
GWHAAZE00000001CDS106033979106034125-
GWHAAZE00000001CDS106033481106033561-
GWHAAZE00000001CDS106033274106033393-
GWHAAZE00000001CDS106031848106031970-
GWHAAZE00000001CDS106030982106031059-
GWHAAZE00000001CDS106030772106030860-
GWHAAZE00000001CDS106028662106028770-
GWHAAZE00000001CDS106028462106028530-
GWHAAZE00000001CDS106028270106028380-
GWHAAZE00000001CDS106024652106024707-
GWHAAZE00000001CDS106024386106024563-
GWHAAZE00000001CDS106024178106024279-
GWHAAZE00000001CDS106024028106024099-
GWHAAZE00000001CDS106023185106023262-
GWHAAZE00000001CDS106021544106021626-
GWHAAZE00000001CDS106020944106020998-
GWHAAZE00000001CDS106020715106020789-
GWHAAZE00000001CDS106020293106020379-
GWHAAZE00000001CDS106020090106020131-
Transcript Sequence

Network for GWHGAAZE003866

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00917.27MATH341531.00E-19
PF00443.30UCH1724932.30E-46
PF12436.9USP7_ICP0_bdg5978491.90E-75
PF14533.7USP7_C28599647.20E-20
Protein Sequence

Gene family

Gene familysubfamily
Ubiquitin FamilyUSP

KEGG pathway

KO Enzyme pathway mapID
K11838USP7, UBP15 FoxO signaling pathway map04068

Gene Ontology

GO term OntologyName
GO:0016579biological_processprotein deubiquitination
GO:0006511biological_processubiquitin-dependent protein catabolic process
GO:0005515molecular_functionprotein binding
GO:0036459molecular_functionthiol-dependent ubiquitinyl hydrolase activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf52.064
SRR3591706second leaf31.844
SRR3591707mature leaf26.042
SRR3591708Shoot apex34.989
SRR3591709Stem40.321
SRR3591710White floral bud40.636
SRR3591711White flower52.691
SRR3591712Green floral bud37.456
SRR3591713Yellow flower48.459
SRP173429 SRR8316895Juvenile bud stage 25.031
SRR8316896Juvenile bud stage 34.897
SRR8316897Juvenile bud stage 17.705
SRR8316894Third green stage 17.783
SRR8316900Third green stage 38.906
SRR8316901Third green stage 35.216
SRR8316898Complete white stage 11.571
SRR8316899Complete white stage 38.517
SRR8316903Complete white stage 28.776
SRR8316902Silver flowering stage18.085
SRR8316904Silver flowering stage34.529
SRR8316905Silver flowering stage13.952
SRR8316906Gold flowering stage 49.579
SRR8316907Gold flowering stage 40.437
SRR8316908Gold flowering stage 47.198
SRP132670SRR6706286Control29.535
SRR6706287Light intensity 50%29.920
SRR6706288Light intensity 20%31.940
CNP0000432CNS0095592Slightly white alabastrum(diploid) 117.503
CNS0095593Slightly white alabastrum(diploid) 215.316
CNS0095594Slightly white alabastrum(diploid) 319.333
CNS0095595Whole white alabastrum(diploid) 217.402
CNS0095596Whole white alabastrum(diploid) 315.016
CNS0095597Whole white alabastrum(diploid) 414.564
CNS0095598Silvery flower (diploied) 123.161
CNS0095599Silvery flower (diploied) 218.704
CNS0095600Silvery flower (diploied) 340.336
CNS0095601Golden flower (diploid) 118.455
CNS0095602Golden flower (diploid) 241.951
CNS0095603Golden flower (diploid) 339.606
CNS0095604Slightly white alabastrum(tetraploid) 123.937
CNS0095605Slightly white alabastrum(tetraploid) 218.612
CNS0095606Slightly white alabastrum(tetraploid) 350.376
CNS0095607Whole white alabastrum(tetraploid) 115.561
CNS0095608Whole white alabastrum(tetraploid) 214.128
CNS0095609Whole white alabastrum(tetraploid) 338.417
CNS0095610Silvery flower (tetraploid) 145.951
CNS0095611Silvery flower (tetraploid) 246.098
CNS0095612Silvery flower (tetraploid) 343.027
CNS0095613Golden flower (tetraploid) 121.675
CNS0095614Golden flower (tetraploid) 238.601
CNS0095615Golden flower (tetraploid) 346.971
CRA001975CRR073297Stem 126.414
CRR073298Stem 224.385
CRR073299Stem 320.333
CRR073300Leaf 129.085
CRR073301Leaf 226.337
CRR073302Leaf 316.973
CRR073303Juvenile bud 119.274
CRR073304Juvenile bud 213.479
CRR073305Juvenile bud 330.199
CRR073306Third green 19.776
CRR073307Third green 27.432
CRR073308Third green 39.897
CRR073309Second white 110.718
CRR073310Second white 214.878
CRR073311Second white 317.545
CRR073312Silver flowering 114.944
CRR073313Silver flowering 216.230
CRR073314Silver flowering 317.129
CRR073315Gold flowering 111.144
CRR073316Gold flowering 221.270
CRR073317Gold flowering 39.853
CRR073318Tawny withering 123.019
CRR073319Tawny withering 220.826
CRR073320Tawny withering 324.784