Detail information of GWHGAAZE003808


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_007204334.11.66274E-50hypothetical protein PRUPE_ppa005262mg [Prunus persica]
Swissprottr|Q9FNY0|E2FA_ARATH4E-33Transcription factor E2FA
trEMBLtr|M5W8E6|M5W8E6_PRUPE6E-51Uncharacterized protein {ECO:0000313|EMBL:EMJ05533.1}
TAIR10AT2G36010.15E-29E2F transcription factor 3

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene104750321104753498-
GWHAAZE00000001mRNA104750321104753498-
GWHAAZE00000001exon104753392104753498-
GWHAAZE00000001exon104752272104752512-
GWHAAZE00000001exon104751096104751162-
GWHAAZE00000001exon104750321104750467-
GWHAAZE00000001CDS104753392104753498-
GWHAAZE00000001CDS104752272104752512-
GWHAAZE00000001CDS104751096104751162-
GWHAAZE00000001CDS104750334104750467-
GWHAAZE00000001three_prime_UTR104750321104750333-
Transcript Sequence

Network for GWHGAAZE003808

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K06620E2F3 Cell cycle map04110
Cellular senescencemap04218

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf3.540
SRR3591706second leaf0.695
SRR3591707mature leaf0.956
SRR3591708Shoot apex4.356
SRR3591709Stem1.017
SRR3591710White floral bud1.942
SRR3591711White flower1.406
SRR3591712Green floral bud0.733
SRR3591713Yellow flower1.975
SRP173429 SRR8316895Juvenile bud stage 1.718
SRR8316896Juvenile bud stage 2.944
SRR8316897Juvenile bud stage 2.203
SRR8316894Third green stage 0.762
SRR8316900Third green stage 2.005
SRR8316901Third green stage 2.464
SRR8316898Complete white stage 1.010
SRR8316899Complete white stage 2.972
SRR8316903Complete white stage 1.998
SRR8316902Silver flowering stage0.988
SRR8316904Silver flowering stage1.886
SRR8316905Silver flowering stage1.319
SRR8316906Gold flowering stage 1.827
SRR8316907Gold flowering stage 3.491
SRR8316908Gold flowering stage 2.321
SRP132670SRR6706286Control2.610
SRR6706287Light intensity 50%3.289
SRR6706288Light intensity 20%2.247
CNP0000432CNS0095592Slightly white alabastrum(diploid) 13.678
CNS0095593Slightly white alabastrum(diploid) 22.724
CNS0095594Slightly white alabastrum(diploid) 33.347
CNS0095595Whole white alabastrum(diploid) 21.335
CNS0095596Whole white alabastrum(diploid) 30.544
CNS0095597Whole white alabastrum(diploid) 41.761
CNS0095598Silvery flower (diploied) 11.500
CNS0095599Silvery flower (diploied) 21.426
CNS0095600Silvery flower (diploied) 31.035
CNS0095601Golden flower (diploid) 10.569
CNS0095602Golden flower (diploid) 20.895
CNS0095603Golden flower (diploid) 31.227
CNS0095604Slightly white alabastrum(tetraploid) 11.977
CNS0095605Slightly white alabastrum(tetraploid) 21.651
CNS0095606Slightly white alabastrum(tetraploid) 33.797
CNS0095607Whole white alabastrum(tetraploid) 11.349
CNS0095608Whole white alabastrum(tetraploid) 20.522
CNS0095609Whole white alabastrum(tetraploid) 31.639
CNS0095610Silvery flower (tetraploid) 12.979
CNS0095611Silvery flower (tetraploid) 22.155
CNS0095612Silvery flower (tetraploid) 32.761
CNS0095613Golden flower (tetraploid) 11.687
CNS0095614Golden flower (tetraploid) 21.804
CNS0095615Golden flower (tetraploid) 31.131
CRA001975CRR073297Stem 12.722
CRR073298Stem 22.264
CRR073299Stem 32.386
CRR073300Leaf 11.049
CRR073301Leaf 21.458
CRR073302Leaf 30.628
CRR073303Juvenile bud 12.088
CRR073304Juvenile bud 20.067
CRR073305Juvenile bud 30.247
CRR073306Third green 13.420
CRR073307Third green 22.210
CRR073308Third green 31.037
CRR073309Second white 10.325
CRR073310Second white 20.221
CRR073311Second white 30.984
CRR073312Silver flowering 10.707
CRR073313Silver flowering 20.295
CRR073314Silver flowering 30.790
CRR073315Gold flowering 10.105
CRR073316Gold flowering 21.859
CRR073317Gold flowering 30.856
CRR073318Tawny withering 11.508
CRR073319Tawny withering 25.187
CRR073320Tawny withering 33.608