Detail information of GWHGAAZE003806


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_007204334.12.03227E-31hypothetical protein PRUPE_ppa005262mg [Prunus persica]
Swissprottr|Q9FNY0|E2FA_ARATH1E-15Transcription factor E2FA
trEMBLtr|M5W8E6|M5W8E6_PRUPE8E-32Uncharacterized protein {ECO:0000313|EMBL:EMJ05533.1}
TAIR10AT2G36010.31E-11E2F transcription factor 3

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene104703096104705158-
GWHAAZE00000001mRNA104703096104705158-
GWHAAZE00000001exon104703096104703229-
GWHAAZE00000001exon104703851104703917-
GWHAAZE00000001exon104704943104705158-
GWHAAZE00000001CDS104704943104705158-
GWHAAZE00000001CDS104703851104703917-
GWHAAZE00000001CDS104703096104703229-
Transcript Sequence

Network for GWHGAAZE003806

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K06620E2F3 Cell cycle map04110
Cellular senescencemap04218

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.691
SRR3591706second leaf0.245
SRR3591707mature leaf0.755
SRR3591708Shoot apex1.563
SRR3591709Stem0.828
SRR3591710White floral bud0.560
SRR3591711White flower0.442
SRR3591712Green floral bud0.325
SRR3591713Yellow flower0.673
SRP173429 SRR8316895Juvenile bud stage 0.133
SRR8316896Juvenile bud stage 0.466
SRR8316897Juvenile bud stage 0.000
SRR8316894Third green stage 0.107
SRR8316900Third green stage 0.349
SRR8316901Third green stage 0.334
SRR8316898Complete white stage 0.426
SRR8316899Complete white stage 0.424
SRR8316903Complete white stage 0.323
SRR8316902Silver flowering stage0.223
SRR8316904Silver flowering stage0.392
SRR8316905Silver flowering stage0.329
SRR8316906Gold flowering stage 0.207
SRR8316907Gold flowering stage 0.372
SRR8316908Gold flowering stage 0.000
SRP132670SRR6706286Control0.215
SRR6706287Light intensity 50%0.164
SRR6706288Light intensity 20%0.382
CNP0000432CNS0095592Slightly white alabastrum(diploid) 10.058
CNS0095593Slightly white alabastrum(diploid) 20.000
CNS0095594Slightly white alabastrum(diploid) 30.280
CNS0095595Whole white alabastrum(diploid) 20.303
CNS0095596Whole white alabastrum(diploid) 30.186
CNS0095597Whole white alabastrum(diploid) 40.147
CNS0095598Silvery flower (diploied) 10.032
CNS0095599Silvery flower (diploied) 20.150
CNS0095600Silvery flower (diploied) 30.102
CNS0095601Golden flower (diploid) 10.030
CNS0095602Golden flower (diploid) 20.074
CNS0095603Golden flower (diploid) 30.177
CNS0095604Slightly white alabastrum(tetraploid) 10.687
CNS0095605Slightly white alabastrum(tetraploid) 20.511
CNS0095606Slightly white alabastrum(tetraploid) 30.595
CNS0095607Whole white alabastrum(tetraploid) 10.270
CNS0095608Whole white alabastrum(tetraploid) 20.153
CNS0095609Whole white alabastrum(tetraploid) 30.617
CNS0095610Silvery flower (tetraploid) 11.104
CNS0095611Silvery flower (tetraploid) 20.386
CNS0095612Silvery flower (tetraploid) 30.537
CNS0095613Golden flower (tetraploid) 10.234
CNS0095614Golden flower (tetraploid) 20.557
CNS0095615Golden flower (tetraploid) 30.129
CRA001975CRR073297Stem 10.261
CRR073298Stem 20.545
CRR073299Stem 30.182
CRR073300Leaf 10.032
CRR073301Leaf 20.109
CRR073302Leaf 30.000
CRR073303Juvenile bud 10.455
CRR073304Juvenile bud 20.000
CRR073305Juvenile bud 30.000
CRR073306Third green 10.409
CRR073307Third green 20.346
CRR073308Third green 30.103
CRR073309Second white 10.070
CRR073310Second white 20.028
CRR073311Second white 30.131
CRR073312Silver flowering 10.048
CRR073313Silver flowering 20.000
CRR073314Silver flowering 30.000
CRR073315Gold flowering 10.000
CRR073316Gold flowering 20.096
CRR073317Gold flowering 30.000
CRR073318Tawny withering 10.368
CRR073319Tawny withering 20.402
CRR073320Tawny withering 30.095