Detail information of GWHGAAZE003443


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_009598788.10PREDICTED: putative nitric oxide synthase [Nicotiana tomentosiformis]
COGYP_006462090.13E-49GTPase
Swissprottr|Q66GP9|NOA1_ARATH0NO-associated protein 1, chloroplastic/mitochondrial (Precursor)
trEMBLtr|A8R0L3|A8R0L3_NICBE0Nitric oxide associated 1 {ECO:0000313|EMBL:BAF93184.1}
TAIR10AT3G47450.20P-loop containing nucleoside triphosphate hydrolases superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene9791511597925796-
GWHAAZE00000001mRNA9791511597925796-
GWHAAZE00000001exon9792535397925796-
GWHAAZE00000001exon9792460697924791-
GWHAAZE00000001exon9792419597924272-
GWHAAZE00000001exon9792356297923648-
GWHAAZE00000001exon9792339397923472-
GWHAAZE00000001exon9792223097922311-
GWHAAZE00000001exon9792022297920242-
GWHAAZE00000001exon9791983697919881-
GWHAAZE00000001exon9791898797919105-
GWHAAZE00000001exon9791872597918838-
GWHAAZE00000001exon9791852297918629-
GWHAAZE00000001exon9791834497918433-
GWHAAZE00000001exon9791799197918094-
GWHAAZE00000001exon9791511597915469-
GWHAAZE00000001five_prime_UTR9792577997925796-
GWHAAZE00000001CDS9792535397925778-
GWHAAZE00000001CDS9792460697924791-
GWHAAZE00000001CDS9792419597924272-
GWHAAZE00000001CDS9792356297923648-
GWHAAZE00000001CDS9792339397923472-
GWHAAZE00000001CDS9792223097922311-
GWHAAZE00000001CDS9792022297920242-
GWHAAZE00000001CDS9791983697919881-
GWHAAZE00000001CDS9791898797919105-
GWHAAZE00000001CDS9791872597918838-
GWHAAZE00000001CDS9791852297918629-
GWHAAZE00000001CDS9791834497918433-
GWHAAZE00000001CDS9791799197918094-
GWHAAZE00000001CDS9791521497915469-
GWHAAZE00000001three_prime_UTR9791511597915213-
Transcript Sequence

Network for GWHGAAZE003443

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01926.24MMR_HSR13173872.60E-08
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K13427NOA1 Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Arginine biosynthesismap00220
Arginine and proline metabolismmap00330
Plant-pathogen interactionmap04626

Gene Ontology

GO term OntologyName
GO:0005525molecular_functionGTP binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf9.952
SRR3591706second leaf16.425
SRR3591707mature leaf17.254
SRR3591708Shoot apex18.655
SRR3591709Stem8.873
SRR3591710White floral bud14.783
SRR3591711White flower25.691
SRR3591712Green floral bud11.270
SRR3591713Yellow flower27.878
SRP173429 SRR8316895Juvenile bud stage 8.546
SRR8316896Juvenile bud stage 11.616
SRR8316897Juvenile bud stage 7.213
SRR8316894Third green stage 4.800
SRR8316900Third green stage 15.891
SRR8316901Third green stage 16.213
SRR8316898Complete white stage 6.179
SRR8316899Complete white stage 17.647
SRR8316903Complete white stage 11.902
SRR8316902Silver flowering stage10.887
SRR8316904Silver flowering stage16.068
SRR8316905Silver flowering stage7.558
SRR8316906Gold flowering stage 27.677
SRR8316907Gold flowering stage 28.455
SRR8316908Gold flowering stage 30.512
SRP132670SRR6706286Control13.333
SRR6706287Light intensity 50%12.796
SRR6706288Light intensity 20%14.440
CNP0000432CNS0095592Slightly white alabastrum(diploid) 18.069
CNS0095593Slightly white alabastrum(diploid) 25.030
CNS0095594Slightly white alabastrum(diploid) 36.620
CNS0095595Whole white alabastrum(diploid) 26.285
CNS0095596Whole white alabastrum(diploid) 36.651
CNS0095597Whole white alabastrum(diploid) 44.892
CNS0095598Silvery flower (diploied) 113.342
CNS0095599Silvery flower (diploied) 212.815
CNS0095600Silvery flower (diploied) 319.835
CNS0095601Golden flower (diploid) 114.048
CNS0095602Golden flower (diploid) 220.941
CNS0095603Golden flower (diploid) 320.618
CNS0095604Slightly white alabastrum(tetraploid) 19.200
CNS0095605Slightly white alabastrum(tetraploid) 27.418
CNS0095606Slightly white alabastrum(tetraploid) 313.019
CNS0095607Whole white alabastrum(tetraploid) 14.510
CNS0095608Whole white alabastrum(tetraploid) 24.180
CNS0095609Whole white alabastrum(tetraploid) 312.574
CNS0095610Silvery flower (tetraploid) 121.471
CNS0095611Silvery flower (tetraploid) 224.452
CNS0095612Silvery flower (tetraploid) 327.037
CNS0095613Golden flower (tetraploid) 118.335
CNS0095614Golden flower (tetraploid) 221.939
CNS0095615Golden flower (tetraploid) 326.184
CRA001975CRR073297Stem 116.037
CRR073298Stem 212.661
CRR073299Stem 315.058
CRR073300Leaf 113.961
CRR073301Leaf 212.147
CRR073302Leaf 38.928
CRR073303Juvenile bud 110.870
CRR073304Juvenile bud 211.265
CRR073305Juvenile bud 310.360
CRR073306Third green 16.371
CRR073307Third green 25.418
CRR073308Third green 36.219
CRR073309Second white 116.032
CRR073310Second white 216.236
CRR073311Second white 322.319
CRR073312Silver flowering 118.260
CRR073313Silver flowering 222.328
CRR073314Silver flowering 317.877
CRR073315Gold flowering 122.531
CRR073316Gold flowering 234.541
CRR073317Gold flowering 320.394
CRR073318Tawny withering 17.410
CRR073319Tawny withering 28.191
CRR073320Tawny withering 38.743