Detail information of GWHGAAZE003345


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrEYU35231.10hypothetical protein MIMGU_mgv1a011203mg [Erythranthe guttata]
Swissprottr|P93798|SNAA_VITVI2E-158Alpha-soluble NSF attachment protein
trEMBLtr|A0A022R4P1|A0A022R4P1_ERYGU0Uncharacterized protein {ECO:0000313|EMBL:EYU35231.1}
TAIR10AT3G56190.12E-106alpha-soluble NSF attachment protein 2

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene9632438796330620-
GWHAAZE00000001mRNA9632438796330620-
GWHAAZE00000001exon9633047696330620-
GWHAAZE00000001exon9632954196329590-
GWHAAZE00000001exon9632935896329430-
GWHAAZE00000001exon9632905696329135-
GWHAAZE00000001exon9632824796328398-
GWHAAZE00000001exon9632764996327808-
GWHAAZE00000001exon9632751596327562-
GWHAAZE00000001exon9632713596327215-
GWHAAZE00000001exon9632438796324467-
GWHAAZE00000001CDS9633047696330620-
GWHAAZE00000001CDS9632954196329590-
GWHAAZE00000001CDS9632935896329430-
GWHAAZE00000001CDS9632905696329135-
GWHAAZE00000001CDS9632824796328398-
GWHAAZE00000001CDS9632764996327808-
GWHAAZE00000001CDS9632751596327562-
GWHAAZE00000001CDS9632713596327215-
GWHAAZE00000001CDS9632438796324467-
Transcript Sequence

Network for GWHGAAZE003345

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF14938.7SNAP72781.00E-111
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K15296NAPA, SNAPA, SEC17 Autophagy - yeast map04138
Synaptic vesicle cyclemap04721

Gene Ontology

GO term OntologyName
GO:0006886biological_processintracellular protein transport
GO:0005515molecular_functionprotein binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf76.216
SRR3591706second leaf24.546
SRR3591707mature leaf11.491
SRR3591708Shoot apex26.427
SRR3591709Stem58.173
SRR3591710White floral bud67.266
SRR3591711White flower29.115
SRR3591712Green floral bud84.318
SRR3591713Yellow flower16.297
SRP173429 SRR8316895Juvenile bud stage 26.423
SRR8316896Juvenile bud stage 50.813
SRR8316897Juvenile bud stage 20.877
SRR8316894Third green stage 22.690
SRR8316900Third green stage 85.581
SRR8316901Third green stage 76.071
SRR8316898Complete white stage 46.387
SRR8316899Complete white stage 122.838
SRR8316903Complete white stage 64.643
SRR8316902Silver flowering stage21.213
SRR8316904Silver flowering stage31.728
SRR8316905Silver flowering stage12.894
SRR8316906Gold flowering stage 21.730
SRR8316907Gold flowering stage 25.362
SRR8316908Gold flowering stage 20.722
SRP132670SRR6706286Control97.270
SRR6706287Light intensity 50%104.400
SRR6706288Light intensity 20%117.434
CNP0000432CNS0095592Slightly white alabastrum(diploid) 149.346
CNS0095593Slightly white alabastrum(diploid) 262.490
CNS0095594Slightly white alabastrum(diploid) 357.199
CNS0095595Whole white alabastrum(diploid) 266.226
CNS0095596Whole white alabastrum(diploid) 379.904
CNS0095597Whole white alabastrum(diploid) 472.659
CNS0095598Silvery flower (diploied) 125.302
CNS0095599Silvery flower (diploied) 233.028
CNS0095600Silvery flower (diploied) 360.719
CNS0095601Golden flower (diploid) 125.817
CNS0095602Golden flower (diploid) 230.830
CNS0095603Golden flower (diploid) 333.435
CNS0095604Slightly white alabastrum(tetraploid) 163.310
CNS0095605Slightly white alabastrum(tetraploid) 253.746
CNS0095606Slightly white alabastrum(tetraploid) 365.005
CNS0095607Whole white alabastrum(tetraploid) 158.746
CNS0095608Whole white alabastrum(tetraploid) 258.821
CNS0095609Whole white alabastrum(tetraploid) 384.175
CNS0095610Silvery flower (tetraploid) 145.679
CNS0095611Silvery flower (tetraploid) 242.379
CNS0095612Silvery flower (tetraploid) 355.471
CNS0095613Golden flower (tetraploid) 121.304
CNS0095614Golden flower (tetraploid) 233.548
CNS0095615Golden flower (tetraploid) 316.414
CRA001975CRR073297Stem 137.847
CRR073298Stem 233.543
CRR073299Stem 337.836
CRR073300Leaf 164.953
CRR073301Leaf 263.928
CRR073302Leaf 376.992
CRR073303Juvenile bud 199.993
CRR073304Juvenile bud 2107.044
CRR073305Juvenile bud 378.132
CRR073306Third green 151.729
CRR073307Third green 270.153
CRR073308Third green 360.837
CRR073309Second white 114.774
CRR073310Second white 224.476
CRR073311Second white 39.868
CRR073312Silver flowering 16.898
CRR073313Silver flowering 22.347
CRR073314Silver flowering 34.732
CRR073315Gold flowering 19.855
CRR073316Gold flowering 217.478
CRR073317Gold flowering 38.462
CRR073318Tawny withering 157.586
CRR073319Tawny withering 244.362
CRR073320Tawny withering 366.148