Detail information of GWHGAAZE003316


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_007008911.11.80286E-44Sequence-specific DNA binding transcription factors [Theobroma cacao]
Swissprottr|Q9LJG8|ASIL2_ARATH3E-35Trihelix transcription factor ASIL2 {ECO:0000305}
trEMBLtr|A0A061FKY6|A0A061FKY6_THECC7E-45Sequence-specific DNA binding transcription factors {ECO:0000313|EMBL:EOY17721.1}
TAIR10AT3G11100.15E-23sequence-specific DNA binding transcription factors

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene9594217795942530+
GWHAAZE00000001mRNA9594217795942530+
GWHAAZE00000001exon9594217795942530+
GWHAAZE00000001CDS9594217795942530+
Transcript Sequence

Network for GWHGAAZE003316

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13837.7Myb_DNA-bind_4241136.40E-26
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyTrihelix

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf26.751
SRR3591706second leaf17.871
SRR3591707mature leaf19.906
SRR3591708Shoot apex24.424
SRR3591709Stem25.229
SRR3591710White floral bud20.356
SRR3591711White flower19.448
SRR3591712Green floral bud17.991
SRR3591713Yellow flower18.231
SRP173429 SRR8316895Juvenile bud stage 18.479
SRR8316896Juvenile bud stage 21.785
SRR8316897Juvenile bud stage 9.610
SRR8316894Third green stage 7.798
SRR8316900Third green stage 26.684
SRR8316901Third green stage 27.714
SRR8316898Complete white stage 14.844
SRR8316899Complete white stage 40.135
SRR8316903Complete white stage 18.745
SRR8316902Silver flowering stage7.918
SRR8316904Silver flowering stage10.221
SRR8316905Silver flowering stage7.337
SRR8316906Gold flowering stage 16.934
SRR8316907Gold flowering stage 17.873
SRR8316908Gold flowering stage 18.097
SRP132670SRR6706286Control42.705
SRR6706287Light intensity 50%37.772
SRR6706288Light intensity 20%33.760
CNP0000432CNS0095592Slightly white alabastrum(diploid) 115.639
CNS0095593Slightly white alabastrum(diploid) 219.144
CNS0095594Slightly white alabastrum(diploid) 38.697
CNS0095595Whole white alabastrum(diploid) 212.373
CNS0095596Whole white alabastrum(diploid) 313.111
CNS0095597Whole white alabastrum(diploid) 416.390
CNS0095598Silvery flower (diploied) 117.576
CNS0095599Silvery flower (diploied) 219.632
CNS0095600Silvery flower (diploied) 331.804
CNS0095601Golden flower (diploid) 115.284
CNS0095602Golden flower (diploid) 234.597
CNS0095603Golden flower (diploid) 329.692
CNS0095604Slightly white alabastrum(tetraploid) 116.345
CNS0095605Slightly white alabastrum(tetraploid) 215.285
CNS0095606Slightly white alabastrum(tetraploid) 331.860
CNS0095607Whole white alabastrum(tetraploid) 116.830
CNS0095608Whole white alabastrum(tetraploid) 29.248
CNS0095609Whole white alabastrum(tetraploid) 321.214
CNS0095610Silvery flower (tetraploid) 136.089
CNS0095611Silvery flower (tetraploid) 248.716
CNS0095612Silvery flower (tetraploid) 354.776
CNS0095613Golden flower (tetraploid) 134.121
CNS0095614Golden flower (tetraploid) 237.122
CNS0095615Golden flower (tetraploid) 338.382
CRA001975CRR073297Stem 148.294
CRR073298Stem 252.032
CRR073299Stem 358.644
CRR073300Leaf 154.586
CRR073301Leaf 258.179
CRR073302Leaf 344.493
CRR073303Juvenile bud 160.129
CRR073304Juvenile bud 249.870
CRR073305Juvenile bud 377.887
CRR073306Third green 130.879
CRR073307Third green 235.514
CRR073308Third green 335.844
CRR073309Second white 130.529
CRR073310Second white 223.867
CRR073311Second white 319.656
CRR073312Silver flowering 119.121
CRR073313Silver flowering 220.999
CRR073314Silver flowering 323.819
CRR073315Gold flowering 139.557
CRR073316Gold flowering 249.482
CRR073317Gold flowering 346.623
CRR073318Tawny withering 148.880
CRR073319Tawny withering 233.173
CRR073320Tawny withering 346.515