Gene detail

Detail information of GWHGAAZE003165

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_009600986.1	0	PREDICTED: exocyst complex component EXO70A1-like [Nicotiana tomentosiformis]
Swissprot	tr\|Q9LZD3\|E70A1_ARATH	1E-74	Exocyst complex component EXO70A1
trEMBL	tr\|A0A068VGW1\|A0A068VGW1_COFCA	0	Coffea canephora DH200=94 genomic scaffold, scaffold_803 {ECO:0000313\|EMBL:CDP19956.1}
TAIR10	AT2G39380.1	3E-145	exocyst subunit exo70 family protein H2

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000001	gene	93077723	93079495	-
GWHAAZE00000001	mRNA	93077723	93079495	-
GWHAAZE00000001	exon	93079141	93079495	-
GWHAAZE00000001	exon	93078390	93079062	-
GWHAAZE00000001	exon	93077723	93078356	-
GWHAAZE00000001	CDS	93079141	93079495	-
GWHAAZE00000001	CDS	93078390	93079062	-
GWHAAZE00000001	CDS	93077723	93078356	-

Transcript Sequence
>GWHTAAZE003171 ATGATGGAAGAAAACATCAAGAACGCCAAGTCCATGGTTGAGAAATGGGACCCTTACGGATCCTCCTCTGTGAAGTTCATTTCTCTCTTTCAGGACAACCGAAAAGAAGCCAAAGGTTACCTAGAATGCATCAAGGGCTTACATCGAGCCATGCACGTCTTGATTTCTGAAGATTCTTGTTCTGATAAGCTTGTGCTTGCACAAAACTTGATGCAAATTTCCATGAAACGACTCCAACAGGAGTTCTATCAGATTTTGTCTACAAATCGCAAGTACTTGGACCCAGAATTAGTTTCTCGCAGATCCTCGCGCTCGTCACTTTCCAGCTCAAATTACTCTGTAGATGAAGCCAATGACCTCAGATCAATTGCTGATTGTATGATTAGATCTGGTTATGGCAAAGAATGTGTAAACATATACCAATTGATCCGAAAATCGATTGTAGAAGGAGGTCTGTACCGTCTGGGGGTAGAACAGTATAGTTCTTCTCAGATTAACAAAATGAGTTCAGAAGTTTCTGAGGATACTATCAAAAACTGGTTGAATGCGACACAAATGGCTGTGAAAACACTTGTCCACAGTGAAAGATTTCTATGCGATCACGTGTTTTCTGCATCCGAAACAGTCAGAGAGAAGTGTTTCACTATTATATCGAAAGAAGGAGCCATCAATTTATTCAAATTCCCTGAACTAGTTGCAAAGAGAAAGAGAGCACCGGAGAAAATTTTCCAGTTAATGGACTTGTATGAGACGATTTCCGTTCTCTTGCCGGAGATTGAATCAATCTTCTCATATGAATCACACTCAGCTATTAGATTACAAGTCCTCTCCTCTCTACACAAGCTTGGCGAGTCCGTCCAATCAATGTTATCCGAGTTCGAGTCATCAATTCAAAAGAACTCGACGAATATAACAATCACAGGTGGAGGAATCCATCCGCTGAATATTTCTGCAATGACTTACTTGCAATTCCTAGCCAATTACAGTGGCGTCCTCACCGACATTATCGGCGATACCACATTTCCAGGTCCAAACATTGAAGGGACTCCAATACCCCCCATTTCAATGCAGTTTGCATGGATCATATTCATCCTCCAATGCAAGCTCGACAGCAAGGCGAAGCTCTACAATGACATTGCTTTGTCGTACATTTGCTTAGCCAACAATCTCCAATTTATAGTCAAGAGGGTCCGTACAACAAATCTAAAGTACCTTCTTGGAGAGGATTGGGTATTAAAGCATGAGAGAAAGGCAAAACAGTATGCAGCAAATTACGAAGCAATAGCTTGGAGTAAGGTCCTTCGATGTCTGCCCGAGAATTCAGCTGTAGCAATATCAGCTGAGATGGTGAAAGAGCGCATTAAGCGTTTTAACTCTGCATTTAAAGAGATGTGTTGGAAACAGACAACGTGGGTGGTAACAGATGGGAAGCTCCAAGAGGAGATTAGAGCGTCAATAACAAAGAAAGTAGTGCCAGCATACAGGGAGCTATACAAGATATACTTGGCGACACTGTGTGGGGAGAAGAATTTGGAAGTGGAAAGGTTAAAACCCGATGACTTGGGCAATTATTTGTCTCTTGTTCAATGGGGGCGGCCTTTTCCCGTAGGTCATCGTTGTAATCATCATTTTTATCAATTGTCTCCTCAATATTTAACCTGA

Network for GWHGAAZE003165

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF03081.16	Exo70	178	526	6.90E-99

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K07195	EXOC7, EXO70	Insulin signaling pathway	map04910

Gene Ontology

GO term	Ontology	Name
GO:0006887	biological_process	exocytosis
GO:0000145	cellular_component	exocyst

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	0.491
	SRR3591706	second leaf	0.082
	SRR3591707	mature leaf	0.000
	SRR3591708	Shoot apex	0.178
	SRR3591709	Stem	0.000
	SRR3591710	White floral bud	0.557
	SRR3591711	White flower	0.082
	SRR3591712	Green floral bud	0.289
	SRR3591713	Yellow flower	0.136
SRP173429	SRR8316895	Juvenile bud stage	0.364
	SRR8316896	Juvenile bud stage	0.589
	SRR8316897	Juvenile bud stage	0.228
	SRR8316894	Third green stage	0.080
	SRR8316900	Third green stage	0.235
	SRR8316901	Third green stage	0.484
	SRR8316898	Complete white stage	0.081
	SRR8316899	Complete white stage	0.148
	SRR8316903	Complete white stage	0.063
	SRR8316902	Silver flowering stage	0.038
	SRR8316904	Silver flowering stage	0.089
	SRR8316905	Silver flowering stage	0.082
	SRR8316906	Gold flowering stage	0.062
	SRR8316907	Gold flowering stage	0.160
	SRR8316908	Gold flowering stage	0.100
SRP132670	SRR6706286	Control	0.018
	SRR6706287	Light intensity 50%	0.034
	SRR6706288	Light intensity 20%	0.125
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	0.335
	CNS0095593	Slightly white alabastrum(diploid) 2	0.113
	CNS0095594	Slightly white alabastrum(diploid) 3	0.319
	CNS0095595	Whole white alabastrum(diploid) 2	0.225
	CNS0095596	Whole white alabastrum(diploid) 3	0.176
	CNS0095597	Whole white alabastrum(diploid) 4	0.586
	CNS0095598	Silvery flower (diploied) 1	0.113
	CNS0095599	Silvery flower (diploied) 2	0.000
	CNS0095600	Silvery flower (diploied) 3	0.380
	CNS0095601	Golden flower (diploid) 1	0.000
	CNS0095602	Golden flower (diploid) 2	0.150
	CNS0095603	Golden flower (diploid) 3	0.255
	CNS0095604	Slightly white alabastrum(tetraploid) 1	0.113
	CNS0095605	Slightly white alabastrum(tetraploid) 2	0.083
	CNS0095606	Slightly white alabastrum(tetraploid) 3	0.095
	CNS0095607	Whole white alabastrum(tetraploid) 1	0.078
	CNS0095608	Whole white alabastrum(tetraploid) 2	0.208
	CNS0095609	Whole white alabastrum(tetraploid) 3	0.162
	CNS0095610	Silvery flower (tetraploid) 1	0.111
	CNS0095611	Silvery flower (tetraploid) 2	0.000
	CNS0095612	Silvery flower (tetraploid) 3	0.133
	CNS0095613	Golden flower (tetraploid) 1	0.000
	CNS0095614	Golden flower (tetraploid) 2	0.055
	CNS0095615	Golden flower (tetraploid) 3	0.042
CRA001975	CRR073297	Stem 1	0.043
	CRR073298	Stem 2	0.159
	CRR073299	Stem 3	0.000
	CRR073300	Leaf 1	0.029
	CRR073301	Leaf 2	0.057
	CRR073302	Leaf 3	0.000
	CRR073303	Juvenile bud 1	0.040
	CRR073304	Juvenile bud 2	0.021
	CRR073305	Juvenile bud 3	0.000
	CRR073306	Third green 1	0.071
	CRR073307	Third green 2	0.000
	CRR073308	Third green 3	0.019
	CRR073309	Second white 1	0.035
	CRR073310	Second white 2	0.040
	CRR073311	Second white 3	0.000
	CRR073312	Silver flowering 1	0.000
	CRR073313	Silver flowering 2	0.202
	CRR073314	Silver flowering 3	0.203
	CRR073315	Gold flowering 1	0.000
	CRR073316	Gold flowering 2	0.357
	CRR073317	Gold flowering 3	0.000
	CRR073318	Tawny withering 1	0.196
	CRR073319	Tawny withering 2	0.226
	CRR073320	Tawny withering 3	0.092