Detail information of GWHGAAZE003091


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_007009776.12.6979E-113Uncharacterized protein isoform 1 [Theobroma cacao]
trEMBLtr|A0A061FND7|A0A061FND7_THECC1E-113Uncharacterized protein isoform 1 {ECO:0000313|EMBL:EOY18586.1}
TAIR10AT5G50840.26E-75Without detailed annotation

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene9193944491943485-
GWHAAZE00000001mRNA9193944491943485-
GWHAAZE00000001exon9193944491939578-
GWHAAZE00000001exon9194021691940311-
GWHAAZE00000001exon9194043291940488-
GWHAAZE00000001exon9194184291942024-
GWHAAZE00000001exon9194317791943254-
GWHAAZE00000001exon9194337591943485-
GWHAAZE00000001CDS9194337591943485-
GWHAAZE00000001CDS9194317791943254-
GWHAAZE00000001CDS9194184291942024-
GWHAAZE00000001CDS9194043291940488-
GWHAAZE00000001CDS9194021691940311-
GWHAAZE00000001CDS9193944491939578-
Transcript Sequence

Network for GWHGAAZE003091

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF09728.10Taxilin14638.60E-13
PF09728.10Taxilin642031.20E-39
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0019905molecular_functionsyntaxin binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf23.748
SRR3591706second leaf15.736
SRR3591707mature leaf12.194
SRR3591708Shoot apex34.946
SRR3591709Stem23.026
SRR3591710White floral bud17.536
SRR3591711White flower21.251
SRR3591712Green floral bud23.212
SRR3591713Yellow flower14.808
SRP173429 SRR8316895Juvenile bud stage 21.909
SRR8316896Juvenile bud stage 26.903
SRR8316897Juvenile bud stage 10.873
SRR8316894Third green stage 10.951
SRR8316900Third green stage 21.303
SRR8316901Third green stage 20.819
SRR8316898Complete white stage 5.744
SRR8316899Complete white stage 22.994
SRR8316903Complete white stage 10.420
SRR8316902Silver flowering stage3.779
SRR8316904Silver flowering stage9.685
SRR8316905Silver flowering stage2.698
SRR8316906Gold flowering stage 7.624
SRR8316907Gold flowering stage 11.131
SRR8316908Gold flowering stage 9.772
SRP132670SRR6706286Control1.449
SRR6706287Light intensity 50%2.078
SRR6706288Light intensity 20%2.260
CNP0000432CNS0095592Slightly white alabastrum(diploid) 122.309
CNS0095593Slightly white alabastrum(diploid) 222.497
CNS0095594Slightly white alabastrum(diploid) 322.663
CNS0095595Whole white alabastrum(diploid) 219.685
CNS0095596Whole white alabastrum(diploid) 318.879
CNS0095597Whole white alabastrum(diploid) 422.341
CNS0095598Silvery flower (diploied) 121.262
CNS0095599Silvery flower (diploied) 218.103
CNS0095600Silvery flower (diploied) 313.119
CNS0095601Golden flower (diploid) 121.727
CNS0095602Golden flower (diploid) 212.751
CNS0095603Golden flower (diploid) 314.130
CNS0095604Slightly white alabastrum(tetraploid) 122.508
CNS0095605Slightly white alabastrum(tetraploid) 221.298
CNS0095606Slightly white alabastrum(tetraploid) 325.073
CNS0095607Whole white alabastrum(tetraploid) 121.581
CNS0095608Whole white alabastrum(tetraploid) 215.067
CNS0095609Whole white alabastrum(tetraploid) 320.233
CNS0095610Silvery flower (tetraploid) 112.668
CNS0095611Silvery flower (tetraploid) 216.968
CNS0095612Silvery flower (tetraploid) 310.905
CNS0095613Golden flower (tetraploid) 19.096
CNS0095614Golden flower (tetraploid) 212.487
CNS0095615Golden flower (tetraploid) 34.512
CRA001975CRR073297Stem 110.211
CRR073298Stem 27.913
CRR073299Stem 36.428
CRR073300Leaf 16.459
CRR073301Leaf 29.536
CRR073302Leaf 33.857
CRR073303Juvenile bud 14.956
CRR073304Juvenile bud 22.254
CRR073305Juvenile bud 32.539
CRR073306Third green 10.585
CRR073307Third green 20.432
CRR073308Third green 30.632
CRR073309Second white 10.343
CRR073310Second white 21.265
CRR073311Second white 31.535
CRR073312Silver flowering 11.188
CRR073313Silver flowering 21.597
CRR073314Silver flowering 31.308
CRR073315Gold flowering 14.702
CRR073316Gold flowering 25.630
CRR073317Gold flowering 31.774
CRR073318Tawny withering 112.127
CRR073319Tawny withering 211.150
CRR073320Tawny withering 310.743