Detail information of GWHGAAZE002849


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_010276105.10PREDICTED: aconitate hydratase, cytoplasmic [Nelumbo nucifera]
COGYP_003703832.10aconitate hydratase 1
Swissprottr|Q9SIB9|ACO2M_ARATH0Aconitate hydratase 2, mitochondrial (Precursor)
trEMBLtr|A0A067EUS4|A0A067EUS4_CITSI0Uncharacterized protein {ECO:0000313|EMBL:KDO54656.1}
TAIR10AT2G05710.10aconitase 3

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene8729157887301658-
GWHAAZE00000001mRNA8729157887301658-
GWHAAZE00000001exon8730123687301658-
GWHAAZE00000001exon8729949787299601-
GWHAAZE00000001exon8729903687299196-
GWHAAZE00000001exon8729886987298961-
GWHAAZE00000001exon8729832187298506-
GWHAAZE00000001exon8729819787298247-
GWHAAZE00000001exon8729790587298066-
GWHAAZE00000001exon8729758987297733-
GWHAAZE00000001exon8729734187297483-
GWHAAZE00000001exon8729716687297222-
GWHAAZE00000001exon8729698587297064-
GWHAAZE00000001exon8729681387296888-
GWHAAZE00000001exon8729646787296652-
GWHAAZE00000001exon8729619287296259-
GWHAAZE00000001exon8729591187296062-
GWHAAZE00000001exon8729483587294956-
GWHAAZE00000001exon8729368187293779-
GWHAAZE00000001exon8729311387293592-
GWHAAZE00000001exon8729249887292596-
GWHAAZE00000001exon8729213587292377-
GWHAAZE00000001exon8729157887291982-
GWHAAZE00000001five_prime_UTR8730151087301658-
GWHAAZE00000001CDS8730123687301509-
GWHAAZE00000001CDS8729949787299601-
GWHAAZE00000001CDS8729903687299196-
GWHAAZE00000001CDS8729886987298961-
GWHAAZE00000001CDS8729832187298506-
GWHAAZE00000001CDS8729819787298247-
GWHAAZE00000001CDS8729790587298066-
GWHAAZE00000001CDS8729758987297733-
GWHAAZE00000001CDS8729734187297483-
GWHAAZE00000001CDS8729716687297222-
GWHAAZE00000001CDS8729698587297064-
GWHAAZE00000001CDS8729681387296888-
GWHAAZE00000001CDS8729646787296652-
GWHAAZE00000001CDS8729619287296259-
GWHAAZE00000001CDS8729591187296062-
GWHAAZE00000001CDS8729483587294956-
GWHAAZE00000001CDS8729368187293779-
GWHAAZE00000001CDS8729311387293592-
GWHAAZE00000001CDS8729249887292596-
GWHAAZE00000001CDS8729213587292377-
GWHAAZE00000001CDS8729191487291982-
GWHAAZE00000001three_prime_UTR8729157887291913-
Transcript Sequence

Network for GWHGAAZE002849

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00330.21Aconitase1556862.40E-169
PF00694.20Aconitase_C8159436.40E-42
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K01681ACO, acnA Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Microbial metabolism in diverse environmentsmap01120
Carbon metabolismmap01200
2-Oxocarboxylic acid metabolismmap01210
Biosynthesis of amino acidsmap01230
Citrate cyclemap00020
Glyoxylate and dicarboxylate metabolismmap00630
Carbon fixation pathways in prokaryotesmap00720

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf9.570
SRR3591706second leaf3.781
SRR3591707mature leaf12.934
SRR3591708Shoot apex12.537
SRR3591709Stem10.849
SRR3591710White floral bud31.260
SRR3591711White flower42.584
SRR3591712Green floral bud22.651
SRR3591713Yellow flower29.942
SRP173429 SRR8316895Juvenile bud stage 7.730
SRR8316896Juvenile bud stage 13.149
SRR8316897Juvenile bud stage 2.045
SRR8316894Third green stage 4.570
SRR8316900Third green stage 12.881
SRR8316901Third green stage 14.025
SRR8316898Complete white stage 6.376
SRR8316899Complete white stage 20.127
SRR8316903Complete white stage 12.507
SRR8316902Silver flowering stage8.554
SRR8316904Silver flowering stage15.995
SRR8316905Silver flowering stage7.404
SRR8316906Gold flowering stage 23.371
SRR8316907Gold flowering stage 18.554
SRR8316908Gold flowering stage 13.162
SRP132670SRR6706286Control11.228
SRR6706287Light intensity 50%11.886
SRR6706288Light intensity 20%12.129
CNP0000432CNS0095592Slightly white alabastrum(diploid) 110.378
CNS0095593Slightly white alabastrum(diploid) 28.202
CNS0095594Slightly white alabastrum(diploid) 39.566
CNS0095595Whole white alabastrum(diploid) 27.951
CNS0095596Whole white alabastrum(diploid) 36.813
CNS0095597Whole white alabastrum(diploid) 47.837
CNS0095598Silvery flower (diploied) 110.923
CNS0095599Silvery flower (diploied) 28.775
CNS0095600Silvery flower (diploied) 317.267
CNS0095601Golden flower (diploid) 17.249
CNS0095602Golden flower (diploid) 214.455
CNS0095603Golden flower (diploid) 312.719
CNS0095604Slightly white alabastrum(tetraploid) 12.397
CNS0095605Slightly white alabastrum(tetraploid) 21.519
CNS0095606Slightly white alabastrum(tetraploid) 33.910
CNS0095607Whole white alabastrum(tetraploid) 11.505
CNS0095608Whole white alabastrum(tetraploid) 21.569
CNS0095609Whole white alabastrum(tetraploid) 32.077
CNS0095610Silvery flower (tetraploid) 16.460
CNS0095611Silvery flower (tetraploid) 26.487
CNS0095612Silvery flower (tetraploid) 311.920
CNS0095613Golden flower (tetraploid) 14.723
CNS0095614Golden flower (tetraploid) 26.501
CNS0095615Golden flower (tetraploid) 35.342
CRA001975CRR073297Stem 18.375
CRR073298Stem 28.473
CRR073299Stem 36.991
CRR073300Leaf 112.470
CRR073301Leaf 29.159
CRR073302Leaf 36.967
CRR073303Juvenile bud 19.295
CRR073304Juvenile bud 27.633
CRR073305Juvenile bud 313.393
CRR073306Third green 19.579
CRR073307Third green 25.769
CRR073308Third green 37.165
CRR073309Second white 19.322
CRR073310Second white 27.065
CRR073311Second white 39.602
CRR073312Silver flowering 17.261
CRR073313Silver flowering 28.986
CRR073314Silver flowering 37.425
CRR073315Gold flowering 13.082
CRR073316Gold flowering 27.550
CRR073317Gold flowering 33.105
CRR073318Tawny withering 13.946
CRR073319Tawny withering 24.441
CRR073320Tawny withering 32.836