Gene detail

Detail information of GWHGAAZE002612

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_010644097.1	6.3024E-163	PREDICTED: BES1/BZR1 homolog protein 4 [Vitis vinifera]
Swissprot	tr\|Q9ZV88\|BEH4_ARATH	1E-135	BES1/BZR1 homolog protein 4
trEMBL	tr\|A0A067DLE1\|A0A067DLE1_CITSI	4E-160	Uncharacterized protein {ECO:0000313\|EMBL:KDO43794.1}
TAIR10	AT1G78700.1	3E-94	BES1/BZR1 homolog 4

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000001	gene	82705429	82709342	+
GWHAAZE00000001	mRNA	82705429	82709342	+
GWHAAZE00000001	exon	82705429	82705644	+
GWHAAZE00000001	exon	82707919	82708670	+
GWHAAZE00000001	exon	82709249	82709342	+
GWHAAZE00000001	CDS	82705429	82705644	+
GWHAAZE00000001	CDS	82707919	82708670	+
GWHAAZE00000001	CDS	82709249	82709342	+

Transcript Sequence
>GWHTAAZE002616 ATGACGACAGGGACGAGGTTGCCGACATGGAAGGAGAGAGAGAACAATAAGAAGAGAGAGAGGAGGAGGAGAGCCATTGCGGCTAAGATCTTCGCCGGACTACGAATGCTGGGTAACTACAAGCTGCCCAAGCATTGTGACAACAATGAGGTTCTCAAAGCTCTCTGCAACGAGGCCGGTTGGACCGTCGAGCCTGACGGCACTACCTACAGAAAGGGATGCAAGCCTTTGGAGCGAATGGACATTATGGGTGGATCTGCATCAGCGAGCCCTTGCTCATCTTATCATCCAAGTCCTTGTGCTTCCTACAACCCCAGCCCAGCCTCCTCTTCCTTCCCAAGCCCGGCCTCCTCTTCTTATGCCACTAATGCCAATGCCGATGGCAACTCCCTCATCCCATGGCTCAAAAACCTCTCTTCTTCATCCTCATCAGCCTCCTCCCACAAGCTGCCCCATCTTTATATCCACACGGGCTCCATCAGTGCTCCAGTCACCCCTCCCTTGAGCTCCCCAACTGCTCGGACCCCTCGAATCAACAACTTTTCTGCCCGGCCCGGCTGGGATGGTGGGCCCCACTACCCCTTCCTTCCGTCCTCCACCCCTCCAAGCCCGGGCCGTAAGATTGTTACAAACAACTCAGAATGGTTTGCGGGCATTCGGGTCCCACAAGGGGGGCCAACCTCTCCAACATTTAGTCTCGTCTCCTCGAATCCCTTTGGGTTCAAGGAAGAGGCTTTAGCCCATGGCGGGTCCAGCATGTGGACACTGGGGCAAAGCGGGACCTGCTCTCCAGCTATTCCAGCGGGGTTTGACCAGAATGCAGACATTCCCATGGGTGAAGTGGTTTCGGACGAATTTGCATTTGGAAGCAATGCAAAAGGACTAGTTAAGGCTTGGGAAGGCGAGAGGATCCACGAGGAGTGTGGTTCAGATGATCTCGAGCTTACTCTTGGGAACTCGAAGACCAGGTTAAGAGTTGAACATGACCTAGTTATTAACCGTGTTAAGTGGATAAACATGAACCTGATATCGGGTTCAAGCCGTGTTATCTGGCCACCATAG

Network for GWHGAAZE002612

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF05687.14	BES1_N	4	139	1.30E-66

Protein Sequence

Gene family

Gene family	subfamily
Transcription Factors Family	BES1

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	29.488
	SRR3591706	second leaf	5.298
	SRR3591707	mature leaf	1.072
	SRR3591708	Shoot apex	66.603
	SRR3591709	Stem	40.200
	SRR3591710	White floral bud	16.833
	SRR3591711	White flower	12.610
	SRR3591712	Green floral bud	19.866
	SRR3591713	Yellow flower	2.214
SRP173429	SRR8316895	Juvenile bud stage	22.696
	SRR8316896	Juvenile bud stage	20.886
	SRR8316897	Juvenile bud stage	9.070
	SRR8316894	Third green stage	7.458
	SRR8316900	Third green stage	14.027
	SRR8316901	Third green stage	14.119
	SRR8316898	Complete white stage	1.634
	SRR8316899	Complete white stage	19.174
	SRR8316903	Complete white stage	5.365
	SRR8316902	Silver flowering stage	2.207
	SRR8316904	Silver flowering stage	4.209
	SRR8316905	Silver flowering stage	1.834
	SRR8316906	Gold flowering stage	3.688
	SRR8316907	Gold flowering stage	5.086
	SRR8316908	Gold flowering stage	6.674
SRP132670	SRR6706286	Control	14.429
	SRR6706287	Light intensity 50%	13.332
	SRR6706288	Light intensity 20%	12.825
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	28.246
	CNS0095593	Slightly white alabastrum(diploid) 2	30.054
	CNS0095594	Slightly white alabastrum(diploid) 3	19.895
	CNS0095595	Whole white alabastrum(diploid) 2	19.075
	CNS0095596	Whole white alabastrum(diploid) 3	15.083
	CNS0095597	Whole white alabastrum(diploid) 4	8.971
	CNS0095598	Silvery flower (diploied) 1	17.795
	CNS0095599	Silvery flower (diploied) 2	14.895
	CNS0095600	Silvery flower (diploied) 3	10.804
	CNS0095601	Golden flower (diploid) 1	10.492
	CNS0095602	Golden flower (diploid) 2	8.801
	CNS0095603	Golden flower (diploid) 3	9.925
	CNS0095604	Slightly white alabastrum(tetraploid) 1	22.984
	CNS0095605	Slightly white alabastrum(tetraploid) 2	18.825
	CNS0095606	Slightly white alabastrum(tetraploid) 3	39.761
	CNS0095607	Whole white alabastrum(tetraploid) 1	11.441
	CNS0095608	Whole white alabastrum(tetraploid) 2	4.867
	CNS0095609	Whole white alabastrum(tetraploid) 3	10.270
	CNS0095610	Silvery flower (tetraploid) 1	6.632
	CNS0095611	Silvery flower (tetraploid) 2	8.311
	CNS0095612	Silvery flower (tetraploid) 3	6.739
	CNS0095613	Golden flower (tetraploid) 1	0.484
	CNS0095614	Golden flower (tetraploid) 2	5.318
	CNS0095615	Golden flower (tetraploid) 3	2.922
CRA001975	CRR073297	Stem 1	36.535
	CRR073298	Stem 2	32.194
	CRR073299	Stem 3	67.674
	CRR073300	Leaf 1	25.083
	CRR073301	Leaf 2	22.644
	CRR073302	Leaf 3	20.121
	CRR073303	Juvenile bud 1	23.366
	CRR073304	Juvenile bud 2	13.151
	CRR073305	Juvenile bud 3	29.026
	CRR073306	Third green 1	6.326
	CRR073307	Third green 2	21.798
	CRR073308	Third green 3	12.709
	CRR073309	Second white 1	1.642
	CRR073310	Second white 2	1.467
	CRR073311	Second white 3	1.501
	CRR073312	Silver flowering 1	0.364
	CRR073313	Silver flowering 2	0.586
	CRR073314	Silver flowering 3	0.307
	CRR073315	Gold flowering 1	9.642
	CRR073316	Gold flowering 2	9.084
	CRR073317	Gold flowering 3	11.436
	CRR073318	Tawny withering 1	50.138
	CRR073319	Tawny withering 2	37.451
	CRR073320	Tawny withering 3	47.387