Detail information of GWHGAAZE002526


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002264437.13.4263E-129PREDICTED: probable glutathione S-transferase [Vitis vinifera]
COGYP_007067680.14E-25glutathione S-transferase
Swissprottr|Q03666|GSTX4_TOBAC5E-120Probable glutathione S-transferase
trEMBLtr|F6HR78|F6HR78_VITVI1E-129Putative uncharacterized protein {ECO:0000313|EMBL:CCB57186.1}
TAIR10AT1G78380.12E-89glutathione S-transferase TAU 19

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene8061837980619834-
GWHAAZE00000001mRNA8061837980619834-
GWHAAZE00000001exon8061837980618720-
GWHAAZE00000001exon8061952080619834-
GWHAAZE00000001CDS8061952080619834-
GWHAAZE00000001CDS8061837980618720-
Transcript Sequence

Network for GWHGAAZE002526

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0012map00982 Drug metabolism - cytochrome P450
map00980 Metabolism of xenobiotics by cytochrome P450
map00983 Drug metabolism - other enzymes
map00480 Glutathione metabolism
map04212 Longevity regulating pathway - worm
GO:0005515 protein binding GOslim:molecular_function
map01100 Metabolic pathways


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02798.21GST_N9761.20E-16
PF13410.7GST_C_21241884.70E-11
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K00799GST, gst Metabolic pathways map01100
Glutathione metabolismmap00480
Metabolism of xenobiotics by cytochrome P450map00980
Drug metabolism - cytochrome P450map00982
Drug metabolism - other enzymesmap00983
Longevity regulating pathway - wormmap04212

Gene Ontology

GO term OntologyName
GO:0005515molecular_functionprotein binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf4.406
SRR3591706second leaf0.850
SRR3591707mature leaf4.823
SRR3591708Shoot apex2.557
SRR3591709Stem7.883
SRR3591710White floral bud2.077
SRR3591711White flower7.745
SRR3591712Green floral bud0.999
SRR3591713Yellow flower4.392
SRP173429 SRR8316895Juvenile bud stage 1.338
SRR8316896Juvenile bud stage 4.752
SRR8316897Juvenile bud stage 1.306
SRR8316894Third green stage 0.039
SRR8316900Third green stage 0.314
SRR8316901Third green stage 0.695
SRR8316898Complete white stage 0.000
SRR8316899Complete white stage 0.709
SRR8316903Complete white stage 0.073
SRR8316902Silver flowering stage0.554
SRR8316904Silver flowering stage0.880
SRR8316905Silver flowering stage0.442
SRR8316906Gold flowering stage 4.415
SRR8316907Gold flowering stage 2.901
SRR8316908Gold flowering stage 2.749
SRP132670SRR6706286Control0.147
SRR6706287Light intensity 50%0.000
SRR6706288Light intensity 20%0.102
CNP0000432CNS0095592Slightly white alabastrum(diploid) 11.012
CNS0095593Slightly white alabastrum(diploid) 20.806
CNS0095594Slightly white alabastrum(diploid) 32.067
CNS0095595Whole white alabastrum(diploid) 21.009
CNS0095596Whole white alabastrum(diploid) 30.614
CNS0095597Whole white alabastrum(diploid) 40.715
CNS0095598Silvery flower (diploied) 19.575
CNS0095599Silvery flower (diploied) 231.077
CNS0095600Silvery flower (diploied) 312.606
CNS0095601Golden flower (diploid) 181.919
CNS0095602Golden flower (diploid) 222.318
CNS0095603Golden flower (diploid) 324.336
CNS0095604Slightly white alabastrum(tetraploid) 10.637
CNS0095605Slightly white alabastrum(tetraploid) 20.817
CNS0095606Slightly white alabastrum(tetraploid) 31.240
CNS0095607Whole white alabastrum(tetraploid) 10.713
CNS0095608Whole white alabastrum(tetraploid) 20.360
CNS0095609Whole white alabastrum(tetraploid) 30.074
CNS0095610Silvery flower (tetraploid) 11.261
CNS0095611Silvery flower (tetraploid) 20.783
CNS0095612Silvery flower (tetraploid) 30.921
CNS0095613Golden flower (tetraploid) 10.932
CNS0095614Golden flower (tetraploid) 20.880
CNS0095615Golden flower (tetraploid) 30.103
CRA001975CRR073297Stem 10.000
CRR073298Stem 20.109
CRR073299Stem 30.146
CRR073300Leaf 10.141
CRR073301Leaf 20.116
CRR073302Leaf 30.031
CRR073303Juvenile bud 10.176
CRR073304Juvenile bud 20.161
CRR073305Juvenile bud 30.181
CRR073306Third green 10.229
CRR073307Third green 20.450
CRR073308Third green 30.234
CRR073309Second white 11.174
CRR073310Second white 21.541
CRR073311Second white 31.269
CRR073312Silver flowering 11.048
CRR073313Silver flowering 23.069
CRR073314Silver flowering 31.786
CRR073315Gold flowering 16.875
CRR073316Gold flowering 23.808
CRR073317Gold flowering 34.099
CRR073318Tawny withering 127.429
CRR073319Tawny withering 245.613
CRR073320Tawny withering 345.566